Shewanella oneidensis: SO_2411
Help
Entry
SO_2411 CDS
T00099
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
son03032
]
SO_2411 (gyrA)
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_2411 (gyrA)
Enzymes [BR:
son01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SO_2411 (gyrA)
DNA replication proteins [BR:
son03032
]
Prokaryotic type
DNA Topoisomerases
SO_2411 (gyrA)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SO_2411 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
AAN55445
UniProt:
Q8EEH1
LinkDB
All DBs
Position
complement(2515883..2518642)
Genome browser
AA seq
919 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIADPALSIEQLMDYIPGPDFPTAAIINGRKGIIDAYKTGRGRA
IMRALAEVETEENGRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHVQ
GMLEKAGDDAARPEWLEPEYGIRDGLYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEEL
LEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKVATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTSRGRPIVNLLPLADGERITAILPVREYAEDKYIIMATSNGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEEVAVLDENGNP
VLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKDDGAILTVTENGYGKRT
ELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTLVRTPANGVSIIG
RNTQGVTIIRTASDEKVVGLQRIDEIQGDEDEVELDENGMPIAPVIAEGDSVQEEPLEEE
DELEELDEDEELDDEQDED
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcatcatctatttcgccaattaatatcgaagacgaactaaagaattcg
taccttgattacgccatgagcgtcatcgtgggacgtgcattaccagacgtgcgtgatggc
cttaagcctgtgcatcgccgcgtgctgtttgccatgagtgaattgaagaacgattggaac
aagccgtacaaaaagtctgcccgtgtggtcggtgacgtgatcggtaaatatcacccccat
ggtgactcggcggtatacgatactatcgtacgtatggctcagcctttctcactgcgttac
accttagtcgatggtcaaggaaacttcggttcggttgacggtgactcagcagcggcaatg
cgttacaccgaaatccgtatggataagttagcgcaccagctcctcgccgatcttgaaaaa
gaaaccgttgactatgtgccaaactacgacggcaccgaacaaattcctgcggtattaccg
acacgcgtccctaacctgttgattaacggttcatcgggtattgcagttggtatggcaacg
aacatcccaccgcacaacttaaccgaagtggttaaaggctgtttagcgctgatcgctgat
cctgcgttgtcgattgaacagctgatggactatattccaggccccgatttcccaactgca
gcgattatcaatggccgtaagggcattattgatgcctataaaaccggccgtggccgtgcc
atcatgcgtgcactggctgaggtggaaacggaagagaatggccgtgaacgcattatcgtc
actgaaatcccgtatcaagtaaacaaagcccgtttaattgagaagattgccgagctggtt
aaagataaaaagcttgaaggcattagcggtctgcgcgacgagtctgacaaagacggtatg
cgcatcgttattgaaattaaacgcggtgaagtgggtgaagttgtcctaaacaacctctat
gctcaaacgcaaatgcagtgctcttttggtatcaacatggtggcgttgactaatggtcag
ccgaagttgttcaacttaaaagaaatgctcgagtgctttattctgcaccgccgtgaagtg
gtaacacgccgcaccgtatttgaactgcgtaaagcgcgcgagcgcgcccatatccttgag
gcattagcggtcgcactggccaacatcgatccgattattgcgctgatcaaagcctcgcca
actccagctgacgctaaagttaaattggttgaacagggctgggcgctcggtcatgtgcaa
ggcatgcttgaaaaagccggtgacgatgcagcacgtcctgagtggttagagccagaatat
ggtatccgcgatggcttatattatctgactgagcaacaggctcaggcgatccttgagctg
cgcttacaccgtttaactgggcttgagcacgataagatcatcgctgaatacgaagagctg
ctcgagtttatcgcaggtctgctgtttattttgcgcagccctgagcgtttaatggaagtg
atcaaagaagagttggaagaaattctagctgaatacggcgatgcccgccgcacagtgatt
aacgccaacgaaattgatatgagtcttgaagacttaatcaacgaagaagacgtggtagta
accttgtcacacttaggttatgccaagtatcaaccactgagcgattatcaagctcagcgc
cgtggtggtaaaggcaaagttgcaacgaaagtgaaagatgaagatttcgttgaaaaactg
ctggttgccaatacccacgacaccattttgtgcttctctgacttcggtaagatgtactgg
ctcaaagtctatcaattaccgctggcgagccgcacttcccgtggtcgtccaattgttaac
ctgctgccgctggctgatggcgagcgcattactgcgattctaccggtacgcgaatacgcc
gaagataaatacatcatcatggcaacctctaacggtaccgtgaagaaaactgcattgacg
gcctacagcaacccacgtgcaaacggtattatcgctgttaacctcaaagacggtgaccaa
ctgatcggtgtcgatatcaccaatggtgatgatgagatcatgctgttctcgaatgaaggt
aaagtggttcgctttaaagaaggcgaagaagtggccgtcctcgatgaaaacggcaaccca
gtgctagatgaagaaggcaacccacagattaacttcaagggcgtgcgtccaatgggtcgt
ggcgcgacgggtgttcgtggtatcaagcttgaagaaggtcaaagagtggtgtctcttatc
gtgcctaaggacgatggcgctatcttaactgtgaccgaaaacggctatggtaaacgtact
gagctgtctgaatatccatcgaagagccgcgcgacgaaaggtgtggtatcgatcaaggtg
agcgaacgtaacggtgctgtcgttggtgcggtacaagtgggcggcaatgacgaaatcatg
ctgatcagcgacaagggcactttagtgcgtacgccagctaatggtgtgtctatcattggc
cgtaacacacaaggcgtgaccattattcgtaccgcaagtgacgagaaagtggttggtctg
caacgtatcgatgagatccaaggcgacgaagatgaagtcgagctggatgaaaacggtatg
ccaatcgccccagttatcgctgaaggtgactctgttcaagaagagcctttagaggaagag
gatgagctggaagaattagacgaagacgaagagcttgacgacgagcaagacgaagactaa
DBGET
integrated database retrieval system
