Shewanella oneidensis: SO_2487
Help
Entry
SO_2487 CDS
T00099
Symbol
edd
Name
(GenBank) 6-phosphogluconate dehydratase Edd
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
son
Shewanella oneidensis
Pathway
son00030
Pentose phosphate pathway
son01100
Metabolic pathways
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
Module
son_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SO_2487 (edd)
Enzymes [BR:
son01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SO_2487 (edd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
AAN55518
UniProt:
Q8EEA0
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(2608570..2610396)
Genome browser
AA seq
608 aa
AA seq
DB search
MHSVVQSVTDRIIARSKASREAYLAALNDARNHGVHRSSLSCGNLAHGFAACNPDDKNAL
RQLTKANIGIITAFNDMLSAHQPYETYPDLLKKACQEVGSVAQVAGGVPAMCDGVTQGQP
GMELSLLSREVIAMATAVGLSHNMFDGALLLGICDKIVPGLLIGALSFGHLPMLFVPAGP
MKSGIPNKEKARIRQQFAQGKVDRAQLLEAEAQSYHSAGTCTFYGTANSNQLMLEVMGLQ
LPGSSFVNPDDPLREALNKMAAKQVCRLTELGTQYSPIGEVVNEKSIVNGIVALLATGGS
TNLTMHIVAAARAAGIIVNWDDFSELSDAVPLLARVYPNGHADINHFHAAGGMAFLIKEL
LDAGLLHEDVNTVAGYGLRRYTQEPKLLDGELRWVDGPTVSLDTEVLTSVATPFQNNGGL
KLLKGNLGRAVIKVSAVQPQHRVVEAPAVVIDDQNKLDALFKSGALDRDCVVVVKGQGPK
ANGMPELHKLTPLLGSLQDKGFKVALMTDGRMSGASGKVPAAIHLTPEAIDGGLIAKVQD
GDLIRVDALTGELSLLVSDTELATRTATEIDLRHSRYGMGRELFGVLRSNLSSPETGARS
TSAIDELY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcactcagtcgttcaatctgttactgacagaattattgcccgtagcaaagcatctcgt
gaagcataccttgctgcgttaaacgatgcccgtaaccatggtgtacaccgaagttcctta
agttgcggtaacttagcccacggttttgcggcttgtaatcccgatgacaaaaatgcattg
cgtcaattgacgaaggccaatattgggattatcaccgcattcaacgatatgttatctgca
caccaaccctatgaaacctatcctgatttgctgaaaaaagcctgtcaggaagtcggtagt
gttgcgcaggtggctggcggtgttcccgccatgtgtgacggcgtgactcaaggtcagccc
ggtatggaattgagcttactgagccgtgaagtgattgcgatggcaaccgcggttggctta
tcacacaatatgtttgatggagccttactcctcggtatttgcgataaaattgtaccgggt
ttactgattggtgccttaagttttggccatttacctatgttgtttgtgcccgcaggccca
atgaaatcgggtattcctaataaggaaaaagctcgcattcgtcagcaatttgctcaaggt
aaggtcgatagagcacaactgctcgaagcggaagcccagtcttaccacagtgcgggtact
tgtaccttctatggtaccgctaactcgaaccaactgatgctcgaagtgatggggctgcaa
ttgccgggttcatcttttgtgaatccagacgatccactgcgcgaagccttaaacaaaatg
gcggccaagcaggtttgtcgtttaactgaactaggcactcaatacagtccgattggtgaa
gtcgttaacgaaaaatcgatagtgaatggtattgttgcattgctcgcgacgggtggttca
acaaacttaaccatgcacattgtggcggcggcccgtgctgcaggtattatcgtcaactgg
gatgacttttcggaattatccgatgcggtgcctttgctggcacgtgtttatccaaacggt
catgcggatattaaccatttccacgctgcgggtggtatggctttccttatcaaagaatta
ctcgatgcaggtttgctgcatgaggatgtcaatactgtcgcgggttatggtctgcgccgt
tacacccaagagcctaaactgcttgatggcgagctgcgctgggtcgatggcccaacagtg
agtttagataccgaagtattaacctctgtggcaacaccattccaaaacaacggtggttta
aagctgctgaagggtaacttaggccgcgctgtgattaaagtgtctgccgttcagccacag
caccgtgtggtggaagcgcccgcagtggtgattgacgatcaaaacaaactcgatgcgtta
tttaaatccggcgcattagacagggattgtgtggtggtggtgaaaggccaagggccgaaa
gccaacggtatgccagagctgcataaactaacgccgctgttaggttcattgcaggacaaa
ggctttaaagtggcactgatgactgatggtcgtatgtcgggcgcatcgggcaaagtacct
gcggcgattcatttaacccctgaagcgattgatggcgggttaattgcaaaggtacaagac
ggcgatttaatccgagttgatgcactgaccggcgagctgagtttattagtctctgacacc
gagcttgccaccagaactgccactgaaattgatttacgccattctcgttatggcatgggg
cgtgagttatttggagtactgcgttcaaacttaagcagtcctgaaaccggtgcgcgtagt
actagcgccatcgatgaactttactaa
DBGET
integrated database retrieval system
