Shewanella oneidensis: SO_2559
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Entry
SO_2559 CDS
T00099
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit DnaQ
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
son
Shewanella oneidensis
Pathway
son03030
DNA replication
son03430
Mismatch repair
son03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SO_2559 (dnaQ)
03430 Mismatch repair
SO_2559 (dnaQ)
03440 Homologous recombination
SO_2559 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
son03032
]
SO_2559 (dnaQ)
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_2559 (dnaQ)
Enzymes [BR:
son01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SO_2559 (dnaQ)
DNA replication proteins [BR:
son03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SO_2559 (dnaQ)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SO_2559 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AAN55589
UniProt:
Q8EE31
LinkDB
All DBs
Position
complement(2689380..2690108)
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISNASRQVILDTETTGMNQGSGAVYLGHRIIEIGCVEVINRRLTGRYYHQYINPGQA
IDPEAIAVHGITDERVANEPRFHQIAQEFIDFISGAEIVAHNANFDVSFMDHEFSLLQPL
GPKTRDICEILDSLDIAKFLHPGQKNNLDALCKRYGIDNSRRHYHGALLDAEILADVYLS
MTGGQTKFNLSNEEVGQEGGGIQRFDPTSLNLKVICASADELVMHEKRLDLVAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatctcaaacgcaagccgtcaggttattttagatactgaaaccacgggtatg
aaccaaggcagtggtgcggtgtatttagggcacagaattattgagataggttgtgttgag
gtcatcaaccgccgtttaacgggccgttattatcaccagtatataaatcccggccaagcg
attgatccagaagcgatcgcggttcatgggatcaccgatgaacgtgttgcgaatgagcca
agattccatcaaatcgcccaagagtttatcgattttatcagtggcgccgaaattgtggcc
cataacgcaaacttcgacgtgagctttatggaccatgagttttccttactgcagccctta
gggccaaagactcgcgacatttgtgagattttagactccctcgacattgctaagtttttg
caccccggacaaaagaacaacttagacgcactctgtaaacgttatggcatcgacaactct
cgtcgccattaccatggcgcattactcgacgccgaaatccttgccgatgtctatttatcg
atgacgggtgggcagactaagtttaatctctctaacgaagaagtcggtcaagaggggggc
ggcattcaacgctttgatcccacatcacttaatcttaaagtgatctgcgcatcggccgat
gaactcgttatgcatgaaaagcgccttgatttagtcgcaaaatcaggaaaatgcctctgg
agaggataa
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