Shewanella oneidensis: SO_2581
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Entry
SO_2581 CDS
T00099
Symbol
fadD
Name
(GenBank) long chain fatty acid CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
son
Shewanella oneidensis
Pathway
son00061
Fatty acid biosynthesis
son00071
Fatty acid degradation
son01100
Metabolic pathways
son01212
Fatty acid metabolism
son02024
Quorum sensing
son04146
Peroxisome
Module
son_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SO_2581 (fadD)
00071 Fatty acid degradation
SO_2581 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SO_2581 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SO_2581 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
son01004
]
SO_2581 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
son04147
]
SO_2581 (fadD)
Enzymes [BR:
son01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SO_2581 (fadD)
Lipid biosynthesis proteins [BR:
son01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SO_2581 (fadD)
Exosome [BR:
son04147
]
Exosomal proteins
Exosomal proteins of breast milk
SO_2581 (fadD)
Exosomal proteins of breast cancer cells
SO_2581 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
Motif
Other DBs
NCBI-ProteinID:
AAN55611
UniProt:
Q8EE09
LinkDB
All DBs
Position
complement(2707890..2709563)
Genome browser
AA seq
557 aa
AA seq
DB search
MDQPWIRHLPKDVPAEINVDQYSSLIDMFETAVAKYADQPAFINMGATLTYRKLEERSRA
FAAYLQNELKLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLIDS
GAKAIVVVSNFARTLEEVVDQTPVKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDL
PHALSMRETLSRGRRMQYVKPVITGDDLAFLQYTGGTTGVSKGAMLTHSNVVANVLQANG
AYSPALRDGSEFVVTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPF
TALTGVNTLFNALVNSSDFSELDFSRLKLSIGGGMAVQKAVADKWQNITKTRLLEGYGLT
EASPLLTCCPYNLDGYNGSIGFPAPSTLIQVRDDAGNVLPQGETGELFGKGPQIMKGYWQ
RPEETAKVIDNDGWLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEEVVALHPK
VIEVAAVGVPNDASGELVKVFVVKKDKSLTAEDIIKHCRVHLTGYKVPKLVEFRDELPKT
NVGKILRRELRDEVKRA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagccttggattagacatttaccaaaagatgtgcctgctgagattaatgtggat
cagtattcatcgcttatcgatatgttcgagaccgcggtggctaagtatgcggatcaacct
gcatttatcaacatgggggccacgctaacttaccgcaaactcgaagaacgcagtcgcgcg
tttgctgcttatttacaaaatgaattgaagctgcagaagggcgaccgtgttgcactcatg
atgcccaatttattgcagtaccccattgcgctcttcggtattttacgtgctggcatggtg
gtggttaacgttaacccactatacacccctcgcgaattaaaacaccagttaattgattcg
ggtgcgaaagcgattgtggtggtgtcgaactttgctcgaacattagaagaagtggtcgat
cagacgcctgttaagagtgtgattatcactggacttggggatctcttaagtgcgccaaaa
cgcactttagtgaactttgttgttaaatacatcaaaaaactggtaccaaaatacgattta
ccccatgcactttcaatgcgcgaaacgctgtcaagaggtcgacgtatgcagtacgtcaaa
cctgttattacaggggatgacctcgcatttttacagtataccggtggtacgactggggtt
tcaaagggtgccatgttgacccacagcaatgtcgtggcgaacgtattgcaggcaaatggt
gcttattcgcctgcgctgcgagatggtagtgaatttgtggtaacagcattgccgctttac
catatttttgcgttaaccgtgaactgcttgctgtttttacacaagggcagtcaaaaccta
ttgatcactaaccctcgtgatatccctggttttgtggctgaactcaaaaaataccccttt
accgcgctgacaggtgtcaacaccttattcaatgctttagttaacagtagtgatttttct
gagttagatttctctcgtctaaaactctccatcggtggcggcatggcagtgcaaaaagcc
gtggccgataaatggcagaacattaccaaaactcgtttactcgaaggttatggcctaaca
gaagcttcaccgttattaacctgttgtccatataatttagatggttacaacggttctatc
ggttttcctgcgccatcaaccttgatccaagtgcgcgatgatgcgggtaatgtcttaccg
caaggtgagactggtgagctgttcggtaaaggcccacagatcatgaaagggtattggcaa
cgtccagaagaaaccgccaaagtgattgataatgacggttggctcgccacgggtgatatc
ggctatatggatgagcagggattcttctatattgtcgatcgtaagaaggacatgatttta
gtgtctggttttaacgtattccccaatgaagtcgaagaggtggttgccttacatcctaag
gtgattgaagtggcagcagtgggtgtgcccaatgacgccagcggtgaattagtgaaggta
tttgtggtgaaaaaagataaatctttaaccgctgaagacatcattaagcattgccgtgtg
catttaacgggatataaagtaccgaagctggtagaatttagggacgagttacctaaaacc
aatgtgggtaagatcctgcgacgagaacttagagacgaagttaagcgtgcgtaa
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