Shewanella oneidensis: SO_2788
Help
Entry
SO_2788 CDS
T00099
Symbol
rlmA
Name
(GenBank) 23S rRNA (guanine745-N1)-methyltransferase RlmA
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
son03009
]
SO_2788 (rlmA)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
SO_2788 (rlmA)
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SO_2788 (rlmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_32
Ubie_methyltran
Methyltransf_23
MTS
Methyltransf_29
Methyltransf_9
mRNA_G-N7_MeTrfase
Methyltransf_36
CMAS
PCMT
Motif
Other DBs
NCBI-ProteinID:
AAN55810
UniProt:
Q8EDG4
LinkDB
All DBs
Position
complement(2910370..2911185)
Genome browser
AA seq
271 aa
AA seq
DB search
MQYICPLCALPLALTERTWGCPQSHKFDMAKEGYVNLLPVQKKNSKDPGDNQQMMFARRE
FLNAGYYQNLSDRVNQLALQYASSAKQILDIGCGEGYYSHRLYNALVAHHSCHLQGVDIS
KSAIKYAAKRYQNLSFCVASAYEIPISSNSVDLAIRIYAPSKVEELQRIMAPGGILITVS
PGPLHHFALKQQIYDQPRLHPESEARIEGFESLHQERLRSQLVLNHSQDISNFLEMTPYA
WKFTAEQKQAFALGGLSCELDFQIEVYRISV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatatatgtcctttgtgcgcgttacctctcgccctaacagaacgaacttgggga
tgccctcagtcacataagtttgatatggcgaaagaaggttatgtcaatctacttcccgta
cagaaaaaaaattccaaagatccgggtgacaatcagcaaatgatgtttgctcgcagggag
ttcttaaatgcgggttattatcaaaacttgagtgatagagtaaaccaattggcactccaa
tatgccagtagtgcaaagcagatccttgatatagggtgcggtgaaggctattacagtcat
cgtttatacaatgcccttgtcgctcatcattcatgtcatctgcagggcgtcgacatttct
aaatcggcgataaaatatgcagccaagcgttatcaaaacttaagcttttgtgtggcgagc
gcctatgaaatacctatttcatcgaacagcgtagatttagcgattcgaatttacgcaccg
tcaaaagttgaagaacttcagcggatcatggcgccaggcggtattcttatcacggtatcg
ccagggcctttacatcattttgcgctgaaacaacaaatttatgaccagcctagattacat
cctgaatctgaggcccgcattgaaggatttgaaagcttacatcaagagcgacttagatca
caactcgtactcaatcacagccaagatatcagcaatttcctcgaaatgaccccctatgca
tggaagtttactgccgagcagaagcaggcctttgctttggggggattaagttgtgaatta
gacttccagattgaggtttatcgcatttcagtctag
DBGET
integrated database retrieval system
