Shewanella oneidensis: SO_2802
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Entry
SO_2802 CDS
T00099
Symbol
msbA
Name
(GenBank) ABC-type lipid A export system bifunctional ATPase and permease components MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
son
Shewanella oneidensis
Pathway
son02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
son00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SO_2802 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_2802 (msbA)
Enzymes [BR:
son01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SO_2802 (msbA)
Transporters [BR:
son02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SO_2802 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
DEAD
AAA_16
RsgA_GTPase
nSTAND3
ABC_ATPase
APS_kinase
NB-ARC
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AAN55824
UniProt:
Q8EDF0
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All DBs
Position
complement(2923571..2925376)
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AA seq
601 aa
AA seq
DB search
MTASPKNEMWTVFKRLMGYLKPMKGMFLLSVVGLIVYGLVDAAFISFIGPFIDKGFSSSA
PAISNGIALPTSQGFHADNQVLLMAPIVVILMFSLRGFANFVSTYGISYMSARLIMDMRQ
QVFEHYLSLPVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDSVTIIGMLGLMFY
NSWKLSLCILVIGPIMGVVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLAFGG
QETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADLTAG
TFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTVPESDTGTYTVARAKGNL
RFDNVSFSYEGQERRALEKIDFEVSQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDIL
LDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYAYPGEVTREQIIEAATLAHAME
FIEQLPDGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQ
GLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQMQFG
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatctcctaaaaacgaaatgtggaccgtattcaagcgattaatgggctatctc
aaaccgatgaagggcatgtttttgctttcagttgtcggcctaattgtgtatgggcttgtt
gacgcggcttttatttcttttatcggaccgtttatcgataaaggcttttccagcagcgcg
cctgcgatcagtaacggtatcgcactccccacgagccaaggctttcatgccgataaccaa
gtgttattaatggcgcccatagtggttattctcatgttttccctgcgtggctttgcaaac
ttcgtatccacctacggtatctcttacatgagcgcccggttaatcatggatatgcgccag
caagtgtttgaacattatttgagtttacccgtaagctacatggataaagaaaacacgggg
aatttgatttcaaaagtgaccttcgataccgagcaaatagcccgggcatcgggcagcgcc
ttgatttcgattgttcgagacagtgtgaccatcatcggtatgttagggttgatgttttac
aactcttggaagctttccctgtgtattttagtgattggtccgattatgggagtcgtgatc
acgattgtgagtcgacgttttcgtaaggtatcgaaacaaatccaaacggcgatgggggat
gtcagtgctgcgactgagcagatgatcaaaggccataaaaacgtactggcttttggtggg
caagagactgagaccgcgcgttttgccaaaattaatgatagaaaccgccatcaaaatatg
aagcttgcagttgcgcaggccgttagccagccacttattatggtgattggctcgtttgct
ttggcctttgtactctatgcggcgagtctggacagtatgaaagctgatctgaccgctggt
acctttgcgacaatcctcggcgcaatgatggccatgttgcaacccatcaaaaacttaacc
cgagttaatgcggagtttcagcgcggtatcgcagcatgtaccacggtatttgaactttta
gacactgtgcccgaatccgatactggtacttatactgtcgcccgtgctaagggaaattta
cgttttgacaatgtctcttttagttacgaaggtcaggagcgccgcgctttagaaaaaatt
gactttgaagtatcccaagggcaaaccttagccttagttggccgttcagggtcgggtaag
tccactatcgcaagcttagtgacacgtttctacaccggattagagtctggcgatattctg
cttgatgatgtgagtatttatgattactcactgaaatcattacgtagccaagtggctttg
gtgtcgcagcaagtcacactgtttaacgatacgattgcgaacaacatcgcctatgcctat
ccgggagaagtgactcgcgagcagattattgaggcggcgaccttagctcatgcgatggaa
tttatcgagcaactgcccgatggcttagatacgcaagtcggtgaaaacggtgtgctactg
tcaggtgggcagagacagcggattgcgattgcgcgggccatgctgcgcgatgcacctgta
cttattcttgatgaagcgacatcggccctcgatactgaatcagaaaaagcgattcagcag
ggattagacaatttacgccaaaaccgcacctcagttgtgattgctcaccgtttatctacg
attgaaagtgccgatcaaatcctcgtggtcgatcaaggtcgtatcgttgagcgcggtacc
cacaaatcgttactcgaacttggtggcatgtatgccaagttataccaaatgcagtttggt
agctaa
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