Shewanella oneidensis: SO_2898
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Entry
SO_2898 CDS
T00099
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
son03036
]
SO_2898 (smc)
Chromosome and associated proteins [BR:
son03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SO_2898 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAN55914
UniProt:
Q7ZAJ7
LinkDB
All DBs
Position
complement(3020984..3024421)
Genome browser
AA seq
1145 aa
AA seq
DB search
MRLKQIKLAGFKSFVDPTKIPFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS
MSDVIFNGSSARKPVSVAGVELVFENKEGRLAGQYASYEEISVKRQVSRDGESWYFLNGQ
KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKERRRET
ESRIRHTRENLERLGDIRSELGKQLDKLSQQAKAATQYRELKQAERKTHAELLVMRFQEL
QSQMASLSEQINSLELQQAAAQSLAQTSELESTELQVKLSQLAEQEQHAVEAYYLTGTEI
AKLEQQLQSQKQRDAQLHTQLEQLSEQLTQNKAKLDTYQASFHALEAELGQLAPQHELQQ
EMMDELQAQWEMSVSRSEAQTEVARTQASAVAQHKLQLELHRSKLVHQQQLNAHKTQLHQ
EQQQELSSLTEHALEDTSASLSQEIELLEQVITQQIEVNQELELALVENTQALDLARGEF
EQLSQRLTSMRARFELVEQWLAKQEELSDKPQLWQSIQVENGWEAAAELALQGLMTLPVG
VSANELGFYTDARCLEKIDDHIEGSPIKLPADVNLAPWLNGLKWADNLASAQAQLASLAA
DERIVTADGYLLGKGFLIAKQDNSQSLVQLSKEQTQLSEAIAECVQARAIQQSKLDELSQ
QLIQVRDSVNQGTQRLHQLQLDKATKSTQLNNAEALAKQREAKRGQLEDTVARTHAELAE
LAGQLMLLAEQEDELADALAQSIDKQQQQSQDAQGDLARHQALKAQISDTQRRLSTLNAS
LQSVTTRMAVSTEQIELQRVRVNELVQSRETLSAQLASVAELHGDQQTAKLSEQLALLLN
QQQSQQQALKALRTQQSSLTETLNSIGLKQKQELGKLEGLTQSLSTLKLRREGLKGQADS
QLAALSEQQIVLAQIIDSLPSDGQPDKWQRDLDQIRQKIIRLGAINLAAIEEFEQQSERK
SYLDHQDEDLNKGLATLEEAIRKIDKETRTRFKATFDAVNEDLGRLFPKVFGGGRAYLAL
TEDDLLETGVTIMAQPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAP
LDDANVERFCRLLKEMSQSVQFIYISHNKITMEMADQLIGVTMHEPGVSRIVAVDLEQAV
AMADA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaacaaataaaacttgccggctttaagtcgtttgtcgaccccaccaaaatt
ccgtttttacaggcattaagcgctattatcggccctaatggctgtggaaaatcaaacgtg
attgatgccgtgcgttgggtgctgggcgaaagctcggctaaacacctgcggggtgactcc
atgagtgacgtgatttttaacggttccagcgcccgcaaacctgtgtcggtggcgggtgtt
gaactggtgtttgaaaataaagaaggccgtctcgctggccaatatgccagttatgaagag
atctcggtcaagcggcaggtgagccgcgatggcgaatcttggtatttcctcaatgggcaa
aaatgtcgccgtaaggatattaccgacctgtttatgggcacagggcttgggccgcgcagt
tatgccattatcgagcagggcaccatctcgcgactgattgaatcaaaaccccaagattta
cgcacctttattgaagaagccgcggggatttctcgctataaagaacgtcggcgtgaaact
gaaagtcgcattcgtcacacccgtgaaaacttagagcgtcttggtgatattcgcagtgaa
ttaggcaagcaattagacaaactcagtcagcaggccaaagccgcaacacaatatcgcgag
ctgaaacaggcggagcgcaaaacccacgccgagttgctggtgatgcgcttccaagaattg
cagagccaaatggcgagtttgtcggagcagattaactcacttgagctgcagcaagcggcg
gcgcaatccctagcgcaaactagcgaattagaaagcactgagctgcaagttaaactttcg
cagttagccgagcaagaacagcacgcggtggaggcctattatctgacgggcacagagatc
gccaagttggagcaacaattacagagccaaaagcagcgcgatgcccagctgcatactcag
ctcgaacagttgagcgagcagctcacccaaaacaaagccaaattagatacttatcaggca
agttttcatgcacttgaagccgagcttggccaacttgcaccacaacatgagttgcagcaa
gaaatgatggatgagctgcaagcccagtgggaaatgagtgtttcacgtagtgaagctcag
actgaagtggctagaactcaagcgtcggctgttgcccaacataagctgcaactcgaatta
caccgcagcaaacttgttcatcagcagcagttgaatgcccataaaacccagttacaccaa
gaacagcagcaagagttgtcctcgctcactgagcatgctttggaggataccagcgcatcc
cttagtcaagaaattgaactcttagaacaagtaataactcagcaaattgaagtgaatcaa
gagcttgagttagcgcttgttgaaaatactcaagcgttagatcttgcacgcggcgaattt
gagcagctgtcacagcggttaacctcaatgcgagcacgctttgagctggttgaacaatgg
ctggcaaagcaagaagaattaagcgataagccgcagctgtggcaaagcattcaagtggaa
aatggctgggaagccgccgccgaactggcgctgcagggcttaatgacattacccgttggc
gttagtgcaaatgagctcgggttttatacagatgcaaggtgcttagaaaagattgatgat
catatcgaaggctcgcccatcaagttgccagcggatgtgaatcttgcaccttggcttaat
gggctaaaatgggcagataatcttgccagcgcccaagcgcagcttgctagcttggcggcc
gatgagcggattgtcactgccgatggttatctactcggcaaagggtttttgattgctaaa
caagacaatagccaatcccttgtgcaactgagtaaagaacaaacgcagttaagcgaggcg
atagccgagtgcgtgcaggcgcgggcaatacagcagtcaaagctcgatgagctttcgcag
caactcatacaggtgcgtgacagcgtaaaccaaggcacgcagcgcttgcatcagttacag
ctcgataaagccactaaatccacccagcttaataatgcagaggcactagccaagcagcgc
gaagctaaacggggacaacttgaagacactgtcgcgcgaacgcatgctgagttagcagag
cttgccgggcagttaatgctgcttgcggagcaagaggatgaactcgctgacgccttagcg
caaagtattgataaacagcagcaacaaagccaagacgcccaaggggatttagcgcggcat
caagcgcttaaggctcaaataagcgatacccagcggcgtttatcaactctcaatgcgagt
ttgcaatcggtgacgactcgcatggcggtcagcaccgagcaaatcgaattacagcgggta
cgtgtcaatgaattagtccagtctcgggaaacgctgtctgcccagcttgccagtgtcgct
gagctgcatggcgatcagcaaaccgcaaagctgagtgaacaattggcgctgttactcaat
caacagcagagtcagcaacaggcgctaaaagcacttaggacacaacaaagttcgctcact
gaaacgttaaacagtataggattaaagcaaaaacaagagcttggtaagcttgagggcttg
actcaaagcctcagcacgttaaagttacgtcgtgagggattaaaagggcaggccgatagc
cagttggcagccctgtcggagcagcaaattgtgctcgctcagattattgattctctgcct
agcgacggtcagccagataagtggcagcgtgatttagatcagatccggcaaaaaattatc
cgcttaggcgcgataaacctcgcggcgatcgaagaatttgagcagcaaagtgagcgaaaa
tcctatttggatcatcaggatgaagatctcaataaaggacttgcaacactcgaagaagcc
attcgtaaaatcgataaggagacccgtacccgctttaaagccacatttgatgcggtcaat
gaggatttgggacgtttattccccaaggtgttcggtggtggacgggcatacttagcgctg
acggaagacgatttattagaaacgggcgtgaccatcatggcccaacccccaggtaagaag
aacagcacaatccatcttctttccggtggtgaaaaagcactaaccgctttatcattggta
tttgcgatttttaggttgaatccagctcccttctgtatgttagacgaagtggatgcgccc
ttagacgatgccaacgtagaacgtttctgtcgattattgaaggagatgtcgcagagcgta
cagtttatctatatcagccataacaaaattacgatggagatggctgatcaacttatcggt
gtgactatgcatgagccgggagtatcccgtatagtcgcagtagatttagagcaagcggtg
gcgatggccgacgcgtga
DBGET
integrated database retrieval system
