Shewanella oneidensis: SO_3006
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Entry
SO_3006 CDS
T00099
Symbol
dcm
Name
(GenBank) Lambda phage type II restriction modification system cytosine-5 DNA methyltransferase Dcm
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
son
Shewanella oneidensis
Pathway
son00270
Cysteine and methionine metabolism
son01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SO_3006 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
son03000
]
SO_3006 (dcm)
03032 DNA replication proteins [BR:
son03032
]
SO_3006 (dcm)
03036 Chromosome and associated proteins [BR:
son03036
]
SO_3006 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
son02048
]
SO_3006 (dcm)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SO_3006 (dcm)
Transcription factors [BR:
son03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SO_3006 (dcm)
DNA replication proteins [BR:
son03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SO_3006 (dcm)
Chromosome and associated proteins [BR:
son03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SO_3006 (dcm)
Prokaryotic defense system [BR:
son02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SO_3006 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AAN56018
UniProt:
Q8ECW6
LinkDB
All DBs
Position
3121689..3123362
Genome browser
AA seq
557 aa
AA seq
DB search
MRGLIVDNFAGGGGASTGMAWALGRSVDIAINHDQDAIAMHSANHPETLHYCESVFDVDP
VQATAGKPVALAWFSPDCKHFSKAKGTKPVNKEIRGLAWVTIRWAMKVRPRVIMLENVEE
FKTWGPLIQCPVTDAMHPCPERKGETFNAFVSMLSTGVDADHPALTECVETLGLLDSAKL
IKGLGYKVEFRELRACDYGAPTIRKRLFMIARCDGQPIVWPQPTHGAPDSEAVKSGKLLP
WRTAAECIDWSLPCKSIFGRKKPLAENTLRRIAKGIQRFVIDAKEPFIVPNDVQLAPFIT
EHANASSQRNMPVNEPLRTICAQVKGGHFAVVQPVLEKVNDNIPTFTEWFAKTKNFGGSY
EEYVSLYGDDQLTDPVLTAANICKHYGGNYTGPGDDLNNPLPTVTTVDHNALITSHMIKL
RGTNIGFPMDEPAHTITAGGLHLGEVRAFFIKYYGNEQDGVACNEPLHTITTNDRFGLVM
IKGEPYQIIDIGMRMLEPHELFACQGFNPEYIINNYNGKSSKKQQVARVGNSVPPQFAEA
LTRANLPELCTQTAEAA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcttaatcgtagataactttgcgggcggtggcggtgcttccactggtatggct
tgggctctaggtcgcagcgtggatatcgcaatcaatcatgatcaagatgctatcgccatg
cactcggccaaccatcccgaaacgctgcactattgcgagtcggtatttgatgtggatcca
gtgcaagccaccgcaggtaagccggttgcgctggcgtggttctcgcccgactgcaaacat
ttcagcaaggccaaaggcactaagccagtaaataaagaaattcgcggcctcgcgtgggta
accattcgctgggcaatgaaggtacgccctcgagtgatcatgcttgagaacgtcgaagaa
tttaaaacgtgggggccgttaattcaatgcccggtaacggatgcaatgcacccatgccca
gagcgcaaaggcgaaacctttaacgcttttgttagcatgttaagcacgggcgttgatgcc
gatcaccctgcactaaccgaatgcgttgaaaccttaggcttgctggatagcgccaagtta
atcaaaggtctcggctataaagtggagtttcgcgaactacgagcctgtgactacggcgcc
ccaactattcgcaagcgcctatttatgattgcccgttgcgatggtcaacccattgtgtgg
ccacagccaacccacggcgcaccagatagcgaagcggttaaatcaggcaagctattacca
tggcgcaccgccgctgagtgcatcgactggtcactcccctgcaaatccatctttggccgt
aaaaagccgctggctgaaaacaccctgcgccgcattgccaaaggtattcagcgctttgtg
attgatgctaaagagccgtttatagtaccaaatgatgtgcagttagcgcctttcatcacc
gaacacgctaacgccagcagccaacgcaatatgcccgttaacgagccattacgaactatc
tgcgcccaagtcaaaggcggtcactttgccgtggtgcaacctgtgcttgagaaggttaac
gacaacatcccaactttcacagaatggtttgccaaaacaaagaattttggtggtagctac
gaggaatatgtttcgctttacggagatgatcaattaacagatcctgtgctcactgccgcc
aatatctgcaagcattacggtggcaattacacaggaccaggtgatgacctaaacaaccca
ttgccaacagtgacaacagttgatcataacgcgctgatcaccagccacatgatcaagctg
cgcggtactaacatcggcttcccgatggacgaacccgcacacaccatcaccgcaggcgga
ttacacctcggcgaagttcgggcgttcttcatcaaatactacggcaacgagcaagacggc
gtggcctgtaacgaaccactgcacactatcaccaccaatgaccgctttggcctagtgatg
atcaagggcgaaccctatcaaatcatcgatatcggtatgcgcatgctcgaaccccatgag
ctattcgcctgccaaggcttcaaccctgaatacatcatcaacaactacaacggcaaatcg
agcaaaaagcagcaagtcgcccgtgttggtaactcagtaccgccgcaatttgccgaagca
ctcacccgagcaaatctccccgagctttgcacacaaaccgccgaagcagcatag
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