Shewanella oneidensis: SO_3068
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Entry
SO_3068 CDS
T00099
Symbol
truA
Name
(GenBank) tRNA pseudouridine38-40 synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_3068 (truA)
Enzymes [BR:
son01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SO_3068 (truA)
Transfer RNA biogenesis [BR:
son03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SO_3068 (truA)
Prokaryotic type
SO_3068 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ArgoL1
Motif
Other DBs
NCBI-ProteinID:
AFV73570
UniProt:
K4PSU2
LinkDB
All DBs
Position
complement(3184712..3185497)
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AA seq
261 aa
AA seq
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MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV
VHFDTNAVRNEGAWTLGVNANLPDNIAVRWAKEVDESFHARFSATARRYRYVIYNHNLRP
GILRQGVSHYHGDIDADKMHIAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVKVTRQGMY
VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMAELLALKDRNQAAATAKPNGLYLVD
VTYPEPYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacgggagtggttatttcggttggcagcgtcag
gccgaagtcgattcagtacaagggcaattagaacaagccttatctaaggtggcgaatgaa
cccattagtttgttttgtgccggaagaaccgatgctggcgtccatgcgactgggcaggtg
gtgcatttcgataccaacgcagtgcgtaacgaaggtgcttggactttaggcgtgaatgcc
aatttgcccgataatattgcagtgcgctgggcaaaagaggtggatgagagctttcatgcg
cgcttttcggccacagccagacgttaccgttatgtgatttacaatcacaatcttcgcccg
gggatcctgcgtcaaggtgtcagccattatcatggcgatatcgatgccgataaaatgcat
atcgcggcacaggcactgctcggtgagcaggactttaccagttttcgagccattcaatgc
cagtctaaaacgccttttcgcaatgtgcacagcgttaaagtgactcgccaagggatgtat
gtcattgtcgatatttcggccaatgctttcctacatcatatggtgcgtaatattgtcggc
tcactgctggagattgggcttggcaaccagccactcacttggatggcagagctattagca
ttaaaggatagaaaccaagccgcggcaacggctaaaccgaacggactctatcttgtggat
gtgacttatcctgagccatatcaattgcccaagttagcgttaggaccactatttatgctg
gattaa
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