Shewanella oneidensis: SO_3113
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Entry
SO_3113 CDS
T00099
Symbol
tgt
Name
(GenBank) queuine tRNA-ribosyltransferase Tgt
KO
K00773
queuine tRNA-ribosyltransferase [EC:
2.4.2.29
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_3113 (tgt)
Enzymes [BR:
son01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.29 tRNA-guanosine34 preQ1 transglycosylase
SO_3113 (tgt)
Transfer RNA biogenesis [BR:
son03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SO_3113 (tgt)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGT
Motif
Other DBs
NCBI-ProteinID:
AAN56119
UniProt:
Q8ECM3
LinkDB
All DBs
Position
complement(3241722..3242846)
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AA seq
374 aa
AA seq
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MKFELDTTDGRARRGRLIFDRGTVETPAFMPVGTYGTVKGMTPEEVRATGADILLGNTFH
LWLRPGEEIMRKHGDLHDFMNWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKI
FLDPEKSMQIQHALGSDVVMIFDECTPYPATEDEARKSMQMSLRWAKRSRDEFDRLENPN
SLFGIIQGSVYEDLRDESLKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPQILADKP
RYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDP
KCDCYTCKNYSRAYLYHLDRCNEILGARLNTIHNLRYYQMLMEGLRGAIETGTLDAFVKD
FYTSQGREVPELVD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaacttgacactaccgacggccgtgcgcgccgtggccggttgatttttgat
cgtggtacggtagaaacgccagcatttatgcccgtcgggacttacggtaccgtgaaaggc
atgacgcctgaagaagttcgtgcgactggcgccgatattctgctcggtaacaccttccat
ttatggttgcgtcccggcgaagaaatcatgcgtaagcacggtgacctgcacgactttatg
aactggcagcgtccaattctcaccgattccggcggttttcaagtgttcagcttgggtgat
attcgtaaaattaccgaagaaggggtgcatttccgctcgccaattaatggtgagaaaatc
ttcttagatcctgaaaaatcaatgcaaattcaacatgcgttgggcagtgatgtggtgatg
atttttgacgaatgtaccccgtatccagcgacagaagatgaagcgcgcaagtcaatgcag
atgtcactgcgttgggctaagcgttcacgcgacgagttcgaccgtctggaaaaccccaat
tcattatttgggattatccaaggcagtgtttatgaagatttacgcgacgaaagcttaaaa
ggcttagtcgaaattggtttcgacggttatgccgtcggcggtttggccgtaggtgagcct
aaggaagatatgcatcgcattcttgagcatgtctgcccacaaattcttgcggacaagcca
cgctatctgatgggggtcggtaagccagaggatttagttgaaggtgtgcgtcgtggtatc
gatatgtttgactgtgtgatgccaacccgtaacgcccgtaacggtcacctgtttaccagt
gaaggtgtgattaagatccgcaatgcgcgtcatcgtgatgacacttcaccacttgatcct
aagtgtgattgttatacctgtaaaaactattcacgggcatacctttaccacttagatcgt
tgtaatgagattctgggtgcgcgtttaaacaccattcacaacttgagatactatcaaatg
ttaatggaaggtttgcgcggtgcgattgagacaggtacattagacgcctttgtgaaggac
ttctataccagtcaaggtcgtgaagtaccagagttagtcgattga
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