Shewanella oneidensis: SO_3128
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Entry
SO_3128 CDS
T00099
Name
(GenBank) ABC-type metal export system bifunctional ATPase and permease component
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
son
Shewanella oneidensis
Pathway
son02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
son00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SO_3128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_3128
Transporters [BR:
son02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SO_3128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_29
AAA_22
AAA
AAA_16
ABC_ATPase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AAN56133
UniProt:
Q8ECK9
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All DBs
Position
3256142..3257971
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AA seq
609 aa
AA seq
DB search
MFKRFESWVEALPDGEPTKPPTGVYAFCRHYTKGYELPLILMSVLTAFIAMLEVSLFGFM
GQLVDWLVKKSPETLYQDEGSTLILMGVMVLVVMPLLVLFHALIMHQTLLGNYPMSIRWL
AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVMKLLDVLVYILVYFTSMLVMVASA
DVRLVIPMLIWLALYIGLQWYFVPRLKTVSTEQADARSTMTGRIVDSYTNITTVKLFAHT
DKEADYAKASMRSFLDTVYRQMRLVTGISVSVQIINYMLAFSIAAVSIALWSDNAISVGA
IAIAVSLALRLNGMSQWIMWEISSLFENIGTVTDGMNTLSKTTLIQDSPDANTLVVKQGQ
IDFNQVSFHYGEDAGVIDELNLNIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGHICI
DGQDIKAVKQDSLRSQIGMVTQDTSLLHRTIRENILYGNPGASEIQLEHAIKQAQAHDFI
NELTDPNGNHGLDAQVGERGVKLSGGQRQRVAIARVLLKNAPILLLDEATSALDSEVEAA
IQESLYELMQGKTVIAIAHRLSTIAAMDRLIVLDQGRIVEQGTHQELIAAGGIYAQLWAH
QTGGFLGVE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgatttgaatcttgggtggaagccctaccggatggcgaaccaactaaacct
cctacgggggtctatgcattttgccgacactacactaagggttatgaattaccacttatc
ttgatgtcagtgttaacggctttcatcgccatgctcgaagtttcactctttggctttatg
ggacaattagtcgattggttagtgaaaaaaagcccagagacgctctatcaagatgaaggt
tcaacgctgatcttaatgggcgttatggtcttagtggtgatgccattgctagtgttattt
catgcgctaatcatgcatcaaaccttactgggcaattatcccatgtcgatccgctggctt
gcgcaccgttatttactcaagcaaagcgtgtccttctatcagaatgattttgcgggccgt
attgccactaaggtgatgcaaacttcacttgcggtgcgtgaaaccgtgatgaaattactc
gatgtattggtgtatatcctcgtgtacttcacctcaatgctggtcatggtggccagtgcc
gatgtgcgtctagtgatcccaatgttgatttggttggcgctctatattggcttgcaatgg
tattttgtgccgcgtcttaaaacggtttcaaccgagcaggccgatgcccgctcgacgatg
acagggcggattgtcgacagttacaccaatatcaccacggtgaagctctttgcccatacg
gataaagaagctgattacgccaaagcaagtatgcgcagtttcctcgatacggtttatcgc
caaatgcgcctcgtcacggggatcagcgtcagtgtacaaatcattaactacatgctcgcc
ttcagcattgccgccgtgtcaatcgcgctgtggagtgacaatgccatctcggtcggtgca
attgcaattgccgtgagtttagcgctgcgccttaatgggatgtcgcagtggatcatgtgg
gaaatcagttcattatttgaaaatatcggtacggttaccgacgggatgaacaccctttcc
aagaccacactcatccaagactcgccggatgcaaataccttagtcgtgaagcaaggccag
atcgattttaatcaggtgagctttcattatggcgaagacgctggcgtgatcgacgaactc
aacctcaatatcaaagcgggtgagaaggtcggccttgtcggccgctcgggcgcgggtaaa
tccaccctagtcaatctgttaatgcgcttttacgatgttgagaaaggccatatttgtatt
gatggacaagacattaaggcggtcaaacaggattcgctacgttcacagattggtatggtc
acccaggatacctccctactccatcgcaccattcgggagaatattctttacggtaaccct
ggggcaagtgaaatccaactcgaacatgcgataaaacaggcacaggcacatgattttatt
aatgaactgactgatcctaatggcaatcatggtttggatgctcaagttggggaacgtggg
gtaaaactctccggcggacagagacagcgtgtagccattgccagggtgctattaaaaaat
gccccgattttactgcttgatgaggccacctcagcattggactccgaagtggaagccgcc
attcaagaaagcttgtacgaattaatgcaaggcaaaacggtgattgctatcgcccatcga
ttatcgactattgctgcaatggacagattaatcgtgctcgatcaaggtcgtatcgtcgag
caaggtacgcatcaggagttgattgccgcaggcggtatttatgcccagctatgggctcac
caaaccggcggatttttaggggttgaatag
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