Shewanella oneidensis: SO_3146
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Entry
SO_3146 CDS
T00099
Name
(GenBank) DNA-binding protein H-NS family
KO
K03746
DNA-binding protein H-NS
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
son03036
]
SO_3146
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_3146
Chromosome and associated proteins [BR:
son03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
SO_3146
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SO_3146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6944
Stathmin
Motif
Other DBs
NCBI-ProteinID:
AAN56146
UniProt:
Q8ECJ6
LinkDB
All DBs
Position
3282744..3283136
Genome browser
AA seq
130 aa
AA seq
DB search
MSEFLEILTHGRRFKAAVKDLSVEELRDLAAKLDKILVERESMEAEELQAIAARNAKIEE
IRQQMEAVGLSIDDLGGVAVKASSKKRAPRPAKYQIEVDGEVIQWTGQGRMPTVFKNEVN
KGRSMDDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttagaaatattaactcacggtcgtcgttttaaagctgctgtaaaagat
ctcagcgttgaagaactgcgtgatttagcggctaagctagataaaatcttagttgagcgt
gagtcaatggaagcagaagagctgcaagctattgcagctcgtaatgccaagattgaagaa
atccgtcaacaaatggaagctgttggtttatcaatcgacgacttaggcggtgttgcggtt
aaagcttcgagcaaaaaacgcgctcctcgtccagcgaaataccaaattgaagttgacggc
gaagtgatccagtggactggtcaaggtcgtatgccaacggtatttaagaacgaagtcaat
aaaggccgttctatggatgatttcttaatctaa
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