Shewanella oneidensis: SO_3171
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Entry
SO_3171 CDS
T00099
Symbol
wbfY
Name
(GenBank) polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
son
Shewanella oneidensis
Pathway
son00541
Biosynthesis of various nucleotide sugars
son00552
Teichoic acid biosynthesis
son01100
Metabolic pathways
son01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SO_3171 (wbfY)
00552 Teichoic acid biosynthesis
SO_3171 (wbfY)
Enzymes [BR:
son01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SO_3171 (wbfY)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
GDP_Man_Dehyd
CoA_binding_3
3Beta_HSD
NAD_binding_4
KR
adh_short
PglD_N
Pyr_redox_2
Ldh_1_N
TrkA_N
Mac
Motif
Other DBs
NCBI-ProteinID:
AAN56171
UniProt:
Q8ECH1
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Position
complement(3307625..3309565)
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AA seq
646 aa
AA seq
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MDFLHFLFSLKRSQKRLVSVAIDSVFLLFAFWFALLVRLDSVDVLFKSQYWGLIVLTIPM
SIAGFIRLGLYRAVLRYIGSQAFTAIVAGVGISTIALVLLAYYGGVDLPRTVPFIYAAFA
LVFVGGARALMRSLVGAGINRRGEPVIIYGAGVSGRQTAIALAQSHEYHPVAFVDDDESL
HNTSIQGLHVYASNQLSKLIKQRPTTRVLLAMPSASRSRRQEIINQLEPLTVKVMTLPAM
ADLVSGDKLFSDVKEVEIEDLLGRDSVAPRQHLLTANIKNKVVMVTGAGGSIGSELCRQI
LKQLPKQLVLFELSEFALYSIERELSATATELGIDVEIVPIMGSVQRENRVQAVMQAFKV
QTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTARAAIAAKVETFVLVSTDKAVRPTNVM
GTTKRMAELALQALAKENHHTRFCMVRFGNVLGSSGSVVPLFRKQIANGGPVTVTHPEIT
RFFMTIPEASQLVIQAGAMGKGGDVFVLDMGKSVKIIDLAAKMIRLSGYDVKDEANPNGD
IAIEFTGLRPGEKLYEELLIGDDVTGTDHERIMTANEIYLPWVELELILNRLDKACHEFN
HEAIREILLAAPTGFAPTDGICDLVWQQRKLFKPADTKAKVVTLVS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggattttttgcattttttattctcattaaagcggtcacagaagcgtttggtcagcgta
gcgatagactcagtttttttgctttttgccttttggtttgcgttgctggtgcgcttggac
tcggtagatgtattgtttaaatcgcaatattggggattgattgtgttaactatccctatg
agtattgctgggtttataaggttggggctttatcgcgcagtgctgcgttatattggctcg
caggcatttactgcaatcgtggctggtgtcggtatttctaccatagctcttgttttacta
gcctattatggcggggtggatttacctcgcacagtgccatttatctatgctgcttttgct
ctcgtttttgtgggtggcgcgcgcgcacttatgcgttcattagtcggtgcaggtattaac
cgccgtggtgagccagttattatttacggtgcgggcgtgagcggacggcaaacggcgatt
gcacttgcacaaagtcatgaataccatccggttgcttttgttgatgatgacgagagtttg
cacaatacatcgatacaaggcttgcatgtttatgcgtcgaatcaattaagtaagcttata
aaacagcgacctacaactcgtgttttgctggcaatgccgagtgcatcacgttcacgtcgt
caagaaattattaatcaacttgagccgcttactgtcaaggtgatgaccttgcccgccatg
gcggacttagtgagtggtgataagttatttagtgatgtgaaagaagtcgaaatcgaagat
ttattgggtcgagattctgttgcgccaagacaacatttattgactgccaatattaaaaac
aaagtagttatggttactggggctggtggttcaatcggttcagagttatgtcgccagatt
ttaaaacagctacctaagcagttagttttatttgagttatcggagttcgcactttattcg
attgagcgtgaactttctgcgactgccactgagctgggtattgatgttgaaatcgtccct
atcatgggctctgtacaacgtgaaaaccgtgtgcaagcggtgatgcaggcgtttaaagtg
cagacggtttaccatgccgcagcctataagcatgtgcctttagttgagcataacgtggtt
gaaggtgtgcgcaataacgtatttggtactttatataccgcgagagcggccattgcggca
aaagtagaaacctttgttttggtttcaactgataaagcagtacgccctacaaatgtgatg
ggtaccactaaacgtatggcagaactggcattgcaagcattagcaaaagagaaccatcac
acccgtttttgcatggtgcgttttggtaatgtgctggggtcttctggttcggttgtgcca
ttatttcgtaaacagattgctaacggcggcccagttactgttactcaccctgaaatcacg
cgcttttttatgacaatccctgaagcatcacagttggttattcaagcaggtgctatgggt
aagggcggtgatgtctttgtgcttgatatgggtaaatcggtcaaaatcattgatcttgca
gcgaaaatgatccgcttaagtggttatgatgtgaaggatgaagcgaaccctaacggtgat
atcgcgattgaatttactggccttcgccccggtgaaaaactgtatgaagagttactgatt
ggcgatgatgtaactggtacagaccatgagcgaattatgaccgcgaatgaaatttacctg
ccatgggttgaattagagttaattcttaatcgtttggataaagcatgccatgagtttaac
catgaggctattcgtgagattttacttgcggcgcctaccggatttgccccaactgacggt
atttgtgatctagtttggcagcaaaggaaattatttaaaccagctgatacaaaagcgaaa
gtggtgacgttagtatcttga
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