Shewanella oneidensis: SO_3230
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Entry
SO_3230 CDS
T00099
Symbol
flrC
Name
(GenBank) two component signal transduction system controlling flagella biosynthesis Sigma54-dependent response regulator FlrC
KO
K10943
two-component system, response regulator FlrC
Organism
son
Shewanella oneidensis
Pathway
son02020
Two-component system
son02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
son00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SO_3230 (flrC)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SO_3230 (flrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
son02022
]
SO_3230 (flrC)
02035 Bacterial motility proteins [BR:
son02035
]
SO_3230 (flrC)
Two-component system [BR:
son02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
SO_3230 (flrC)
Bacterial motility proteins [BR:
son02035
]
Flagellar system
Flagellar assembly proteins
Others
SO_3230 (flrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA_16
AAA_19
DUF2089
MerR
AAA
AAA_14
MCM
HTH_24
nSTAND3
AAA_3
AAA_7
HTH_50
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AAN56229
UniProt:
Q8ECB3
LinkDB
All DBs
Position
complement(3368840..3370180)
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AA seq
446 aa
AA seq
DB search
MSEAKLLLVEDDASLREALLDTLMLAQYDCIDVASGEEAILALKQHQFDLVISDVQMPGI
GGLGLLNYLQQHHPKLPVLLMTAYATIGSAVSAIKLGAVDYLAKPFAPEVLLNQVSRYLP
LKQNRDQPVVADEKSLSLLSLAQRVAASDASVMILGPSGSGKEVLARYIHQHSSRAEEAF
VAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEISEMDLGLQAKL
LRVLQEREVERLGGRKTIKLDVRVLATSNRDLKAVVAAGQFREDLYYRINVFPLTWPALN
QRPADILPLARHLLTKHAKALNVVDLPEFDDAACRRLLSHRWPGNVRELDNVVQRALILR
AGALITANDIIIDAQDVPLTSDDAEYMSEPEGLGEELKAQEHVIILETLVQCQGSRKLVA
EKLGISARTLRYKMARMRDMGIQLPS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccaaattgctcttagttgaagatgatgcgtccctgcgtgaagcattgctc
gatacgttaatgttggcgcaatacgattgtatcgatgtggcatccggtgaagaggccatt
cttgctctaaaacaacatcaatttgatctggtgattagcgatgtacaaatgccggggatt
ggtggcttaggcttattaaattatttacagcagcatcatcccaagttgcccgtgttgtta
atgacggcttacgccacgattggcagtgcggtaagtgctatcaagctgggtgcggtggat
tatctggcaaaaccctttgcccctgaggtgttattaaaccaagtatcccgttatttaccg
ctaaaacaaaatcgcgatcaacctgtcgtggcagatgaaaagagcctctcgttattgtcc
ttggcgcaacgggttgcagcctcagatgcttcagtgatgatccttgggccaagtggttca
ggtaaagaagtgttggcgcgttacattcatcaacacagcagtcgggctgaagaggccttt
gtggcaatcaactgcgcagcaatccccgaaaatatgcttgaggcgacattattcggctat
gaaaagggtgcctttactggtgcttatcaggcttgccctggtaagtttgaacaggcgcag
ggcggtaccttattgctcgatgaaatttcagaaatggatttaggtcttcaggcgaaacta
ctgcgtgtgttacaagaacgtgaagtggaacgtttaggggggcgcaaaaccattaagctg
gatgtgagagtgctggcaacctcaaatcgggatttaaaagctgtagttgccgcagggcaa
tttagggaagatctctattatcgtataaatgtatttccactcacttggccagcactgaat
caacggccagcggacatcttaccccttgcgaggcatttgcttacaaaacacgcaaaggcg
cttaatgtcgttgatttacctgagtttgatgatgccgcttgccgccgtttacttagccac
cgttggccaggtaacgtacgagagctggataacgttgtgcagcgagcgttaattttacgc
gcgggggcgttgatcactgccaatgacattattatcgatgctcaagatgtaccgctaaca
tccgatgacgccgaatatatgagcgagcctgaaggtttaggtgaagagttaaaggcgcag
gagcatgtgatcattctcgaaaccttagttcaatgccaaggcagccgtaagttggttgct
gagaaactggggatcagcgcgcgcaccttaagatacaaaatggccagaatgcgggatatg
ggtattcaattgcctagctaa
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