Shewanella oneidensis: SO_3311
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Entry
SO_3311 CDS
T00099
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase HisS
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
son
Shewanella oneidensis
Pathway
son00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SO_3311 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
son01007
]
SO_3311 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_3311 (hisS)
Enzymes [BR:
son01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SO_3311 (hisS)
Amino acid related enzymes [BR:
son01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SO_3311 (hisS)
Transfer RNA biogenesis [BR:
son03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SO_3311 (hisS)
Prokaryotic type
SO_3311 (hisS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
DUF883
Motif
Other DBs
NCBI-ProteinID:
AAN56309
UniProt:
Q8EC33
LinkDB
All DBs
Position
complement(3462362..3463639)
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AA seq
425 aa
AA seq
DB search
MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVAAYGYSEIRTPIVENTDLFKRSIGEVT
DIVEKEMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFHQFGVEIYGIGSADIDAEVLMLSARLWEKLGITEHVTLELNTLGDPAERAAYREA
LIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDPQVQSILADAPALMDYLGEESSQHFAQL
RELLDAVGIQYRVNSRLVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKET
PAVGFAMGLERIVLLLETLALTQDIPAEVDVYVAAMGDNCLVEAIKVAQELRSALPTLRV
MSHCGGGNLKKQMKRADKSGAQVALLIGEEELAEGVVTVKYLRNDNEQQRVARNALSAFL
AELTK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggaatgaatgacattctgccaactcaaagtcct
ctatggcaaaaagtggaagcggtattacgttcaagcgttgctgcttacggttacagcgag
atccgcactccaatagtggaaaataccgatctttttaaacgctctatcggtgaagtaact
gatattgttgaaaaagaaatgtataccttcgaagaccgtaatggcgatagtctgacgttg
cgccccgaaggcaccgcctcgactgtgcgtgctggcaatgagcatggtttgctgtataac
caagaacaacgtttgtggtacatgggccctatgtttcgccatgagcgcccgcaaaaaggc
cgttaccgtcaattccatcaatttggtgtggaaatttatggtattggtagtgctgatatc
gacgctgaagtgttgatgttatccgcccgtctttgggaaaagctagggatcactgagcat
gtgacgcttgagctcaataccttaggcgatcctgccgagcgcgccgcttaccgtgaagcg
ttaattgccttcttagaacaacataaagacaaattagacgaagatagtcagcgccgtatg
tacagtaatccactgcgcgtactggactcgaaagatccacaagtacaaagcatcttagcc
gatgcgcctgcgctgatggattacttaggtgaagaatcttcacaacattttgcacaattg
cgtgaactcctcgacgctgttggcatccaataccgagttaactctcgtttagtccgtggt
ttggattactataatcgtacggtttttgaatgggttaccaatagcttaggctctcaaggc
actgtgcttgcgggtggtcgctatgatggtttagtcgcgcagctgggtggtaaagaaacg
cctgcggtgggttttgcgatgggattagagcgcatcgtcctactactcgaaaccttagcg
ctgacacaggatatccctgcagaagtggatgtttatgttgccgctatgggggataactgc
ctagttgaagccatcaaagtggctcaagaattgcgctcggcgttgcccaccctgagagtc
atgagtcactgtggtggtggcaatctgaagaaacaaatgaagcgtgccgataaaagcggc
gctcaagtagccttactgattggcgaagaagaactcgccgaaggtgtggttacggtgaaa
tatttacgcaatgacaacgaacaacaacgggtcgctcgaaatgcattaagcgcattttta
gctgaacttaccaaataa
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