Shewanella oneidensis: SO_3471
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Entry
SO_3471 CDS
T00099
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase GlyA
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
son
Shewanella oneidensis
Pathway
son00260
Glycine, serine and threonine metabolism
son00460
Cyanoamino acid metabolism
son00630
Glyoxylate and dicarboxylate metabolism
son00670
One carbon pool by folate
son00680
Methane metabolism
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
son01230
Biosynthesis of amino acids
son01240
Biosynthesis of cofactors
son04981
Folate transport and metabolism
Module
son_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SO_3471 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SO_3471 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SO_3471 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SO_3471 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SO_3471 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SO_3471 (glyA)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SO_3471 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AAN56464
UniProt:
Q8EBN8
LinkDB
All DBs
Position
complement(3616039..3617292)
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AA seq
417 aa
AA seq
DB search
MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKTYQQQVVNNAKAMVE
VFLERGYKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKQLTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgttcaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcacaaggttcacaattaaccaacaagtacgccgaaggttatcct
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacttacgcaaacgtacaacctcactcaggttctcaa
gcaaacagcgccgtttatatggcattgttaaaaccaggcgataccgttttagggatgaat
ttagcccacggtggtcacttgacccacggttcacctgtaaacttctcaggtagactgtac
aacatcattccttacggtatcgatgaatcaggcaaaatcgactatgacgaaatggaacgt
ctggccgtagaacacaaacctaagatgatgatcggtggtttctctgcttactcaggtatt
gttgactgggcaagaatgcgcgaaattgcagacaaaatcggtgcttatctgttcgttgat
atggcgcacgtagcgggtcttattgctgctggcgtgtatccaaaccctgtgccacacgct
cacgttgtgacttcaacgacccacaagaccttagcgggtcctcgtggtggtatcatcctg
tctgctgccgatgatgaagagctatacaagaagctaaactctgcggtattccctggcggt
caaggtggtcctttgatgcacgttatcgcgggtaaagcggttgccttcaaagaagctcta
gagccagaattcaaaacctaccaacagcaagtggttaataatgctaaagctatggttgaa
gtgttccttgagcgcggttacaaaatcgtctctggcggaaccagcaaccacttaatgcta
gttgacctgattggtcgtgacttgaccggtaaagaagccgatgccgccttaggcagcgct
aacattaccgtgaataaaaactcagtgccgaatgaccctcgttcaccattcgtgacttct
ggtgtacgtatcggtacccctgcgattacgcgccgtggctttaaagaagccgaagcgaaa
caattaactggttggatctgtgacatcctcgacgatgcccataatcctgcggtcatcgag
cgcgtaaaaggccaagtattggcactgtgcgctcgtttccctgtttacggttaa
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