Shewanella oneidensis: SO_3545
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Entry
SO_3545 CDS
T00099
Name
(GenBank) outer membrane porin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_3545
Transporters [BR:
son02000
]
Other transporters
Pores ion channels [TC:
1
]
SO_3545
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
TSP_3
DUF748
Opacity
OprF
Phenol_MetA_deg
DUF3575
Motif
Other DBs
NCBI-ProteinID:
AAN56536
UniProt:
Q8EBH3
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All DBs
Position
3701769..3702866
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AA seq
365 aa
AA seq
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MMKNTLKVVLLTSMLPLAASASQELTPWYVGAGLGVNNYEHIATDNGDDNPYAWDIFAGY
MFNDYFGAEIGYRDLGSADWTTGGISNDAGVKGATLGLVGVWPLGNRWSLSAEAGAMYYT
LENSQHTGTTSSSYSSNDFAPYVGAGVGYNFTDNLKLQAKYRRYENLDDTDFNTIEADSN
YWGLELSYRFGTPAAAAPVAAAVVAAAPVDSDNDGVYDDKDECPATPATHKVDSVGCTLY
ENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGHASNVGKPEYNM
VLSDKRADAVAKILVEKYGISQSRVTSNGYGITKPLVAGNSKEAHAANRRIEAIVTTTEK
QPVLK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaacacattaaaagtagttttgcttacatcaatgcttccacttgctgccagc
gcatctcaggaattaacaccttggtatgttggcgcaggtttaggcgttaataactatgaa
cacattgcaactgacaacggcgatgacaacccatacgcatgggacatcttcgctggctat
atgtttaatgactactttggtgcagaaatcggctatcgtgatctaggtagtgctgactgg
actactggtggcattagcaatgatgcaggcgttaaaggtgcaactctgggcttagttggt
gtatggccactgggtaaccgttggagcctatctgctgaagcgggtgcaatgtactacacc
ttagaaaacagccaacatactggcacaacttcaagctcatacagctctaacgattttgca
ccttacgtcggtgcaggcgtaggttataacttcacagataacctgaagttacaagctaaa
tatcgtcgttatgaaaacttagacgacacagacttcaacaccattgaagctgacagcaac
tactggggcttagaactaagctaccgttttggtacaccagcagccgcagcaccagttgca
gcagcggtagttgcagcggcaccagttgactcagacaacgatggtgtttatgacgataaa
gatgagtgccctgcgacgccagcaactcacaaagttgactctgttggctgtactctctat
gaaaacgttaagaagcaagaagatgtaggttcaatccaatttgctaacgattctgctgta
gtgaagaaagagtactacaaagatatcgaaagattggctaactacatgaataaaaaccca
gaattcacagttgaaatcgcgggtcacgcttctaacgtaggtaaaccagaatacaacatg
gttctgtctgacaagcgtgctgacgctgttgctaagatccttgtcgaaaagtatggtatt
agccaaagccgtgtaacctcaaatggttacggtattactaagcctttagtagctggtaat
tcaaaagaagctcatgcagctaaccgccgcatcgaagctatcgtgacaactactgaaaaa
caacctgttctgaagtaa
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