Shewanella oneidensis: SO_3565
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Entry
SO_3565 CDS
T00099
Symbol
cpdB
Name
(GenBank) bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3`-nucleotidase CpdB
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
son
Shewanella oneidensis
Pathway
son00230
Purine metabolism
son00240
Pyrimidine metabolism
son01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SO_3565 (cpdB)
00240 Pyrimidine metabolism
SO_3565 (cpdB)
Enzymes [BR:
son01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SO_3565 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SO_3565 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AAN56556
UniProt:
Q8EBF3
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All DBs
Position
3727579..3729636
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AA seq
685 aa
AA seq
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MLNKKLLAVMITAALGVSACGSDDEPIVQADLRVLETTDLHTNIMDFNYYSGKVDPTIGL
VRTASLIHAARSESKNSVLVDNGDLLQGSPMGDYMAKVGLQMGDVHPAYKAMNLLDYEVG
NIGNHEFNYGLDFLNKSLHGAKFPYINANVYCADDDGCWNGVKKGEHLFTPYIIKEKQII
DSEGNNQTIKIGYIGFVPPQILLWDKQNLTGKVTVEDIVATAKKYVPEMKAKGADLIIAI
PHSGIGSTENPGDPMAENATYALTNVKDINAIMFGHSHSIFPDAKYADLPNTDVTKGLLN
GVPAVMPGRWGDNLGVVDFKLERKDGKWSVLSASTKARPIYDGATKTPLVERDQEIIDAV
AAEHQGTLTFVDQPIGIAAADMYSFLTLVQDDPTVQIVSDAQIANVKAKLPEALKNLPVL
SASAPFKAGGRHGTTSDADQYVQVDKGALTFKNAADLYLYPNTMVAVKATGAELKDWLEC
SANQFKQIDPTQTAPQELINWDGHPTYNFDVLDGLTYKIDVTQPSKFDRDCAVVNASANR
IVDLRYTDENGKVFTGEEFAAKEFIVASNNYRAFGGKFAGTGSDHVVLELPDTNREALAA
YITAQSKYNEATGKYEGMVNPSADYNWDFKTINTNVTLDIRFQTQDSDKAATFIEANKQR
EMKKISKDELGFAVYSINLSQDKTK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaaaaactactcgcagtgatgatcactgccgcccttggtgtaagcgcctgt
ggctcagatgatgaaccaattgttcaagcggatttacgtgtacttgaaaccacagatctg
cacaccaatatcatggatttcaactactacagtggtaaagtggacccaacaatcggtctt
gtgcgtaccgcaagtttaatccatgctgctcgtagcgaatcgaaaaacagtgttctggtg
gataacggcgacctactccaaggaagtccaatgggcgactatatggcgaaagtcggtctg
caaatgggtgatgttcacccagcctataaagcaatgaacctattagactatgaagtcggt
aatattggtaaccacgaatttaactatggtttagacttcttaaataaatcactccatggt
gcaaaattcccttatattaacgccaacgtatattgtgccgatgatgatggctgctggaat
ggtgtaaaaaaaggtgaacatttattcaccccttatatcattaaagaaaaacaaatcatc
gatagtgaaggcaataaccaaaccattaaaattggttatattggttttgtgccaccacaa
attttattgtgggataaacaaaatctcacgggtaaagtcaccgttgaagatatcgttgcc
accgcgaaaaagtatgtgcctgaaatgaaagccaaaggcgctgatttaattatcgcaatc
ccccactctggtatcggctcaacggaaaatccaggcgatccaatggctgaaaacgccacc
tacgcattaacaaatgtaaaagatattaatgcgattatgtttggtcacagccactccatc
ttccctgatgcaaaatatgccgatttgcctaatacagacgtcactaaaggtttgctaaat
ggtgtaccagcggttatgccaggacgctggggcgataacttaggtgtagtcgattttaaa
ctggagcgtaaagacggtaagtggtcggtactaagcgcctcgacgaaagcgcgtcctatc
tatgatggcgccactaaaacaccattagtggagcgtgaccaagaaattattgatgcagta
gcggctgagcaccaaggcactttaaccttcgtagatcagcctattggcattgctgctgcg
gatatgtatagcttcttgaccttagtgcaagacgatccaacggtacaaatcgtctcggat
gcccaaattgctaacgtcaaagctaaattacccgaggcgttaaagaatctgcccgtatta
tccgcctcagccccctttaaagccggtggtcgccatggcaccactagcgatgctgaccaa
tatgtgcaggtggataaaggtgcattaaccttcaaaaacgccgccgatctttacctctac
cccaataccatggtggcagtaaaagccacaggtgcagagcttaaagactggttagaatgt
tcagcaaaccagtttaaacaaatcgatccaacccaaacggcgccacaggaattaatcaac
tgggatggccacccaacttataacttcgacgtactcgatggcttaacctataagattgat
gtcacccaaccaagcaagttcgaccgagattgtgcagtcgtcaacgcgagtgctaaccgt
atcgtcgatttaagatataccgatgaaaatggtaaagtattcactggcgaagaatttgcg
gctaaagaatttatcgtggcctcaaataactatcgcgcctttggtggtaagttcgcaggc
acaggcagtgaccatgtagttctggaactgccagataccaaccgtgaagccttagcggcc
tatatcacggcgcaatctaagtacaatgaagcaacaggcaagtacgaaggtatggtaaac
ccaagtgctgattacaactgggattttaaaactatcaatacaaacgttacgttggatatt
cgtttccaaacccaagatagcgacaaagcagctacctttatcgaagcgaataaacaacgc
gaaatgaaaaagatcagcaaagatgaactcggtttcgcggtttacagcattaatttaagc
caagataaaacgaaataa
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