Shewanella oneidensis: SO_3654
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Entry
SO_3654 CDS
T00099
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
son
Shewanella oneidensis
Pathway
son03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SO_3654 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_3654 (ung)
Enzymes [BR:
son01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SO_3654 (ung)
DNA repair and recombination proteins [BR:
son03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SO_3654 (ung)
Prokaryotic type
SO_3654 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AAN56640
UniProt:
Q8EB78
LinkDB
All DBs
Position
complement(3808980..3809636)
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AA seq
218 aa
AA seq
DB search
MTWPAFIDHQRTQPYYQQLIAFVNQERQVGKVIYPPKEDVFNAFKTTPLEQVRVVLIGQD
PYHGPDQAHGLCFSVKRGVKAPPSLANMYKELVNDIPGFHIPNHGDLTQWAEQGILMLNT
VLTVEQGQAHSHANAGWEIFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHQILS
GPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQWQI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgacttggccagcatttatcgaccatcaacgtacacagccttactatcaacagctgatc
gcgtttgtgaatcaagagcgacaagtaggcaaggtaatttatcctcccaaagaggatgtg
tttaatgcatttaagactacgccgctggagcaagtacgcgtagtgttaattggccaagat
ccctaccatggccctgaccaagcccatggtttgtgtttctccgttaaacgtggggttaaa
gcaccgccttcgcttgccaatatgtataaagaattggtgaacgatattcccggcttccac
attcccaatcatggcgatttaactcaatgggcagagcaggggattttaatgcttaatacc
gtgctgacggttgagcaggggcaagcgcattcccatgccaatgcggggtgggaaatcttt
acgactgaagcgctaaaactgcttaatgcccaggaacgcccgattatcttcgtgctgtgg
ggcagtcatgccatcaaaaaaggcgcggtgattaccgcgccacaacaccaaattctctct
gggccgcatccatcaccgttatcggcttatcgcggattttttggctgtgggcatttttcg
aaagtgaatcaattgctaatggcacggggtgaagcgccgattcaatggcagatttaa
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