Shewanella oneidensis: SO_3757
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Entry
SO_3757 CDS
T00099
Name
(GenBank) transcriptional regulator of bicarbonate utilization LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
son03000
]
SO_3757
Transcription factors [BR:
son03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SO_3757
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AAN56738
UniProt:
Q8CX39
LinkDB
All DBs
Position
complement(3904203..3905195)
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AA seq
330 aa
AA seq
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MDKSSQGQLKLRHLSFRLLEVYVQVVRLGNISAAARALHLTQPTVSLQLKKLADILGEPL
LNSTDGRMSPTLVGQELYRAACDTLSRFEDVNAFIQQARGGSVGHINIGLVTTAKYVVPR
ILGAFYRQFPQVKVTLNIGNRAHILGRFERQEDDLYLFSHPPSGEQVLSARIIKNPLQLI
APKDHWAVNRQQIRFSELKQERFIMREPGSATRLMFESWCSAQGIALSDTMQIESNEAIR
LSVASGLGLSVISAHTLQEGREKPAVLSVSGFPLESNWYLVGRRDRRLPYAAMQLVEFMA
THLAECIEPEWVAADIQHLSTIFAPASLSR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcttctcaaggtcaactgaaactacggcatttgagttttcggctacttgag
gtttatgtacaggtggttcggctgggcaatatttcggcggcggctcgcgccctacacctt
actcagcctaccgtgtcactgcaacttaaaaagttagcggatattttgggcgaacccttg
ctaaacagcactgatggccgtatgtcgcccaccttagttggacaagagctgtaccgagcc
gcctgcgataccctaagtcgctttgaagatgtcaatgcctttatccagcaggccagaggc
ggcagtgttggccatatcaatatcggtttggtaactacggcaaaatatgtggtaccacgg
attttaggggcgttttatcggcaatttccgcaggtaaaagtgaccttaaatatcggcaac
cgcgcgcatattttggggcgattcgagcgtcaagaagatgatttatatctctttagtcat
cctcccagtggtgagcaagtgttatcggcaaggatcatcaaaaatccgctgcagcttatt
gcgcctaaggatcattgggcggttaaccgtcagcagatacgctttagcgagttgaagcaa
gagcgctttattatgcgcgaacctggttctgcaacccgcttgatgtttgaatcttggtgc
agcgcccaaggaatagccctgagcgataccatgcaaattgagagtaacgaagcgatacgc
ttgagcgtggcatcgggcttaggcttatcagtgatttcggcccacacgctacaggaaggg
cgcgagaaaccggcggtattgtccgtaagcggatttccactggagagtaattggtatctt
gttggccgtcgggaccgacgtttaccctatgccgccatgcagctagtggaatttatggcg
actcatcttgccgaatgtattgagccagagtgggttgccgcagatattcagcacttaagt
actatctttgcgcctgcgagtttgtctcggtag
DBGET
integrated database retrieval system
