Shewanella oneidensis: SO_3827
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Entry
SO_3827 CDS
T00099
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase KdsA
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
son
Shewanella oneidensis
Pathway
son00541
Biosynthesis of various nucleotide sugars
son01100
Metabolic pathways
son01250
Biosynthesis of nucleotide sugars
Module
son_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SO_3827 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
son01005
]
SO_3827 (kdsA)
Enzymes [BR:
son01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
SO_3827 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
son01005
]
Lipid A
SO_3827 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
AAN56804
UniProt:
Q8EAR9
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All DBs
Position
complement(3977384..3978232)
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AA seq
282 aa
AA seq
DB search
MSNKIIKLGSIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKKTFNLPLITDVHETYQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLKQMKAIDDLVKSFEPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatcataaagttagggtcaatcgaaattgcaaacgataaaccttttgtg
ctatttggtggcatgaatgtgcttgaatctcgcgatctggcgatgtcgattgctgaaacc
tatgctgaagtgacccagaaactaggcatcccctatgttttcaaggcatcattcgataag
gcgaatcgctcttctgttaactcttaccgtggcccaggtatggaagaaggcttaaagatt
tttgaagaaatcaaaaagacctttaacctgccattgatcaccgatgtgcatgagacttac
caatgtgcacctgtagctgaagtggttgatattatccagttgccagcttttttagcccgt
caaacagacttagttgtcgctatggcgaaaactggcgctatcatcaatgtgaaaaaacca
cagtttttagcaccccacgaaatgcgtcatatcatcacgaaatttaacgaagcgggtaat
gatgagattatcctctgtgaacgtggttcatgctttggttacaataacttagtcgtggat
atgctgggtatggatgagatgaaacaatcgggttacccagtgattttcgacgcaacccac
gcattgcaacgtcctggtggccgtgccgattctgcgggcggtcgtcgtgctcaagcgact
gaactagcccgtagtggtatggcgttaggtttagcgggtctgtttattgaggctcacccc
gatcctgataatgctaagtgtgatggcccctgtgcgttaccacttcaccaattagagaat
tatctcaagcagatgaaggcaattgatgatttagtcaaatccttcgagccaattgatacc
agcaaataa
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