Shewanella oneidensis: SO_3916
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Entry
SO_3916 CDS
T00099
Symbol
alr
Name
(GenBank) alanine racemase biosynthetic Alr
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
son
Shewanella oneidensis
Pathway
son00470
D-Amino acid metabolism
son01100
Metabolic pathways
son01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SO_3916 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SO_3916 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
SO_3916 (alr)
Enzymes [BR:
son01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
SO_3916 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
Precursor biosynthesis
Racemase
SO_3916 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AAN56891
UniProt:
Q8EAI6
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All DBs
Position
complement(4062295..4063371)
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AA seq
358 aa
AA seq
DB search
MKPFPRAEISSSALQNNLAVLRQQASSSQVMAVVKANGYGHGLLNVAKCLNNADGFGLAR
LEEALELRAGSVKARLLLLEGFFRSTDLPLLVEHDIDTVVHHESQIEMLEQATLSKPVTV
WLKVDSGMHRLGVTPEQFSAVYARLTACKNVAKPIHLMTHFACADEPDNHYTQVQMQTFN
QLTADLPGFRTLANSAGALYWPKSQGDWIRPGIAMYGVSPVTGDCGANHGLIPAMNLVSR
LIAVREHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVWINGRRVPIVGR
VSMDMLTVDLGHDATDQVGDDVLLWGQALPVEEVAEHIGTIAYELVTKLTPRVAVCLA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccttttccccgagcagaaattagcagtagtgcactgcaaaacaacctcgccgtt
ttacgccagcaggcgagcagcagtcaagtcatggccgtggtgaaagccaatggatatgga
catggattattaaatgttgccaaatgcttaaacaatgccgatggtttcggcttagctcgt
ttggaagaggcattagagctgcgcgcaggtagtgttaaggcgcgcttattattgcttgag
ggtttttttcgcagcaccgacttacctttgctggtggagcacgatattgatactgtggtg
catcacgaatcgcaaatcgagatgttagaacaggcgacactatcgaaaccagtgacagta
tggttgaaagtcgattcggggatgcatcgtttaggggtcacgcctgaacagttctcagcg
gtttatgcgcgtttgacggcctgtaaaaatgtcgccaagcctatccatctgatgacccac
tttgcctgtgccgatgagcccgacaatcattacactcaagtgcaaatgcaaacctttaac
cagttaactgcagatttacctgggtttagaaccttagcgaactcggcgggtgcgctttat
tggccgaagagccaaggtgattggatccgtccaggcattgcgatgtatggtgtgtcaccc
gttactggggattgcggcgcaaatcatggtttgatccctgcaatgaacttggtttcacgt
ttgatagcggtgcgcgagcacaaagcgaatcaacccgtaggttatggttgttactggacc
gccaaacaagatactcgtcttggcgttgtcgcgattggttatggtgatggctatccacgt
aatgcgccggaaggcacgcctgtatggataaatggccgcagagtgccgattgttggccgg
gtatctatggatatgttaacagtggatttaggccatgatgcaacagatcaagtcggtgat
gatgttttgctttggggtcaggctttacctgttgaagaagtcgctgagcatattggtact
atcgcctatgagttagtgactaagctgactccgagagtcgctgtttgcttagcatag
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