Shewanella oneidensis: SO_3917
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Entry
SO_3917 CDS
T00099
Symbol
dnaB
Name
(GenBank) replicative DNA helicase DnaB
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
son
Shewanella oneidensis
Pathway
son03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SO_3917 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
son03032
]
SO_3917 (dnaB)
Enzymes [BR:
son01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SO_3917 (dnaB)
DNA replication proteins [BR:
son03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SO_3917 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
GvpD_P-loop
DUF5410
nSTAND3
PAXNEB
DUF1421
Gal-bind_lectin
Motif
Other DBs
NCBI-ProteinID:
AAN56892
UniProt:
Q8EAI5
LinkDB
All DBs
Position
complement(4063448..4064854)
Genome browser
AA seq
468 aa
AA seq
DB search
MSQQGAFKPKSKPRDLQVDSLKLPPHSIEAEQSVLGGLMLDADAWDKVAETVVKEDFYSR
SHRMIFAAMHRLVETGQPIDLITVSEQLELENQLEEAGGFAYLGEIAKNTPSAGNIVSYA
EIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEQRTNANEGPEGIK
TILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI
MLEQGKMYIDDGSGLTPTEVRSRARRIAREHGGLSMIMVDYLQLMQVPALSDNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YNNDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaaggtgcttttaagcctaagagtaagccaagggatttgcaggtcgatagc
ctcaagctgccgccgcattcaattgaggctgaacaatcggtattaggcggcctcatgtta
gacgccgacgcttgggataaagtggccgaaacggtagttaaagaggatttttattctcgc
tcgcaccggatgattttcgccgccatgcaccgtttagtcgaaacaggccaacctatcgac
ttaattacggtttccgaacaacttgaacttgaaaaccaactcgaagaagcgggcggcttt
gcctacttgggtgagattgccaaaaacaccccgagtgcaggcaacattgtttcttatgct
gaaattgtccgtgagcgcgccgtagtacgcgagatgatccgcgtcgcccatgagattgct
gatgcgggttataatcccgaaggccgcgattccagcgctttactcgatttggccgagagt
aaagtctttaagattgccgagcagcgcaccaatgccaacgaaggtcccgaaggcattaaa
accattcttgaaaagaccgtcgataaaattgagcagctctacaataacccccacaacggt
gtgactggggtatcgagtggttttagcgatctcgataaaatgacggctggcttccaatct
ggcgacttgattattgtcgcagcgcgtccgtctatgggtaaaacgacctttgcgatgaac
ctgtgcgaacaggcggcgatgaatgaagacaagcccgtgttgattttcagtctcgagatg
ccctcagagcagattatgatgcgtatgttggcttctttagggcgcgttgaccaaaccaaa
atccgtactggacaactcgatgatgaggattgggcgcgggtatcctcaaccatggggatt
atgctcgaacaaggcaagatgtatatcgacgacggttcaggcttaacgccgaccgaagtg
cgcagccgtgctcgccgtattgcccgtgaacatggcgggttatcgatgatcatggtcgac
tacttacagctgatgcaagttccggcgttatcggacaaccgtacccttgaaattgctgaa
atctctcgctctctcaaggcattggctaaagagttagagatccccgttatcgcactttct
cagcttaaccgctcgctcgaacaacgtgccgataagcgccctgtgaactccgacttacgt
gaatcgggttctattgagcaggatgcggatctcatcatgtttatttaccgtgatgaggtg
tataacaacgactctccggataagggcacggcggaaatcattatcggtaaacagcgtaac
ggcccgattggacgggtgcgtttaacattccaaggccagttttcccgttttgataactat
gcaggtcctcagtttgaagaagattaa
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