Shewanella oneidensis: SO_4169
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Entry
SO_4169 CDS
T00099
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_4169
Enzymes [BR:
son01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SO_4169
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SO_4169
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
AAN57142
UniProt:
Q8E9U4
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Position
4341822..4343387
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AA seq
521 aa
AA seq
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MQLQQQLQHFHTVRLILGDQLNAEHTWYQQVDPKVLYLIAELHQENTYVTHHVQKICAFF
SAMAQFASELGAAGHQVRYLTLDDTQDFADLNALLQYYVAETGAIKFEYQRPDEYRLLAQ
LSQLKLANAVVNCVDTEHFLFPFDEIDREFPQGQHRLMEHFYRRMRKRFNILMTDVKPVG
GQWNFDVNNRQKLKSQDIKSLPTPLMFGHNVQDILARLQRHGINTMGKADTHLLWPINRA
QSLELLQYFCEYCLPAFGRFQDAMTQQHPAQWSLYHSRLSFSLNAKLISPLEVINAVIEH
YHANPFIEIAQVEGFVRQILGWREYVRGIYWANMPKYASINALEATRKLPDYFWHGKTRM
NCLHHALSQSLDFAYAHHIQRLMVIGNFCLLTEIAPDEVDKWYLGVYVDAIEWVEMPNTR
GMALFADGGIVGTKPYAASGSYINKMSDYCGSCHYKIKERSGESACPLNSLYWRFMDKHR
AQLTHNPRIAMLYRTWDNTEKSVKQAILATAEQHLAQLERL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacagcagcaattacagcacttccatacggttaggctgattttgggcgatcag
cttaatgccgagcatacttggtatcagcaagtcgaccctaaggtgctgtatttaatcgca
gaattgcatcaagaaaatacctatgtgacgcaccatgtgcaaaagatctgtgcgttcttt
agtgccatggcgcagtttgccagcgagcttggcgctgcggggcatcaagtgcgttacctc
accctcgacgatacccaagactttgccgatcttaatgccttactccaatactatgtcgcc
gaaacgggggcgattaagtttgaatatcaacggcctgacgaatatcgactcctcgcgcaa
ttaagccagttgaagttggccaatgccgttgtgaattgcgtcgatactgagcacttttta
ttcccctttgacgagattgatagggaatttccccaagggcaacacaggctgatggagcat
ttttatcggcgaatgcgcaaaagattcaatatcttaatgacggatgtcaagcccgttggc
ggacagtggaattttgatgtcaacaacaggcaaaaacttaaatcccaagatatcaaatct
ttacctacacccttgatgtttggccacaatgtacaagatattctcgctcgccttcaacgc
catgggattaatactatgggcaaggcggatacgcatttactctggccgataaaccgcgcg
caaagcctcgaattacttcagtatttttgtgaatactgcctacccgcatttggccgcttt
caagatgcgatgacccagcaacatccagcgcagtggagcctgtatcacagtcggctgtcc
tttagcctaaacgctaaacttatcagcccattagaagtgatcaatgcggtgattgagcac
tatcatgccaacccttttattgagatagcccaggtcgaaggctttgttcggcaaatcctc
ggctggcgtgaatatgtgcgcggcatctattgggcgaatatgccaaagtacgccagcatt
aatgccctcgaggccacgcgcaagctgcccgactacttttggcatggcaagactcgaatg
aattgcctgcaccacgccttatctcagtcactggattttgcctatgcccatcatattcaa
cgcttaatggtgattggcaacttctgtttattgaccgaaatcgcccccgatgaagtggat
aaatggtacttaggcgtgtatgtggatgcgattgaatgggtcgaaatgcccaacactcgc
ggcatggcgctattcgccgatggcggtattgtcggcactaaaccctatgccgcaagcggc
agttatatcaataaaatgagtgattactgcggcagttgtcattacaagataaaagaacgt
agcggcgaatcagcctgcccattgaacagcctgtattggcgctttatggataaacaccgc
gcgcagctcacccataatccacgcatcgccatgctgtaccgcacttgggataacactgag
aagtcggttaaacaggcaattttggccactgcggaacagcatctagcgcaacttgaacgg
ctataa
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