KEGG   Shewanella oneidensis: SO_4267
Entry
SO_4267           CDS       T00099                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system restriction endonuclease cleavage subunit HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
son  Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:son00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:son02048]
    SO_4267 (hsdR)
Enzymes [BR:son01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SO_4267 (hsdR)
Prokaryotic defense system [BR:son02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SO_4267 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 Helicase_C DEAD DUF4145 HSDR_N AAA_19 RPW8 UvrD-helicase
Other DBs
NCBI-ProteinID: AAN57238
UniProt: Q8E9K4
LinkDB
Position
complement(4444284..4447850)
AA seq 1188 aa
MALDTQGQSTEKDSANFSFLKPYDPIFIDLACSAERAFTSDPNTTLIKLRQLGEAMAQDI
AARCGIEFDDKTTQADLLFKINRELTLEPVVRQLFHALRIEGNKATHQFRTQHKEALEGL
KLARSLAIWFHHTFGDQKTAFKAGPFVPPEDPSKQLQELQTQIELLRSELNDNHQQLADN
QQLTTLLAREKEEYAVLAEQMDAEARALSKLAAQHEQALVAQKHQFELRIKALQAELVQL
AQVDNQAATKNKKQLSQQASKAGNHIELNEELTRVLIDQQLIEAGWIADSQRLDFRKGTR
PEKGKNLAIAEWITWHKGKKGRADYVLFCGLIPVAVVEAKKENTHVAGKISQAERYSKGY
KLIAPQQGAWEIEGRTVAWADDADGHYHIPFVYSCNGREFNKQLAELSGTWFRDTRKPSN
TKRALQQFHSPDGLLDKLKRSREAAEQTLQQEGFDYLGLRDYQQKAIAAVESALAQDNTQ
CLLAMATGTGKTRTIIGLMYRFLKAERFRRILFLVDRTALGEQACDSFDEAKLEQNKVLS
SIYNIAELGDMKSEAETRIQVATVQAMVKRIFMSDNPPPLDEFDCIIVDEAHRGYALDQQ
MTEGELATRDASQYLSSYRRVLDYFDAVRIGLTATPAKHTSEIFGKPVYTYSYREAVAGD
WLIDHEPPIRYETLLNKHGIKFEKGETVTSINTQTGEIETADLEDELKFDVESFNKRVIT
ESFNEVICQELIKELDPFGDEKTMIFCATDVHADMVKRLLDKAFLDMYGDDYNQAAVAKI
TGQSDKVSQLIRQYKNERYPNIAITVDLLSTGIDVPKICHLVFLRRVKSRILYEQMMGRA
TRRCDDIGKTAFKIYDPVDIYSALEAVNTMKPIVKDPNITLEQLVDELTDDTFLERALNT
PGEQVGAGADSHTNSHAHDVLNQLGQKVMRVMRKATKKAENKPELKAKLEQLEELWGVAP
AKLHQHLHQIGPREAAQFFKQHQSLINQLAEVRYLVGSDSMPLIYEGRDEFIERQQNYGI
HEKPADYLESFSHFIKQNINQSAALSVVVNRPKDLTRAQLKEVKLLLDEAGYSEAHLQSA
WRKNTNQDIAASIIGYIRQAALDEALIPFAQRVNNAMQRIYSEHDWNPNQRKWLDRLAKQ
LVHEAVIDKAFVNNRFASDGGAKRFNSVLNDQLDTILDELNAYLWQVG
NT seq 3567 nt   +upstreamnt  +downstreamnt
atggcattagacacacaaggccagagtactgaaaaggactctgctaactttagttttctc
aaaccatacgaccctatttttatcgatttggcctgcagtgctgaacgtgcgtttaccagc
gatcccaacactaccttaattaagctgcgccagttaggtgaagcgatggcgcaagatatt
gcggctcggtgcggcatagagtttgatgacaaaacgactcaagcagatttactcttcaaa
attaatcgtgagttaaccttagagcctgtggtccgccagttatttcatgccttaaggatt
gaaggcaataaagccactcaccaatttcgaacccaacataaagaagcattagaaggctta
aagcttgctcgtagcctagcgatttggttccatcatacctttggcgatcaaaagaccgca
tttaaagccggcccgtttgtcccacctgaagatcccagtaagcaactgcaagagttacaa
actcaaattgaattattgcgtagtgaacttaacgataaccaccagcaattagccgataat
cagcaattaacaacattactggcccgtgaaaaagaagagtacgcggtattagctgagcaa
atggatgcagaggcgcgagcgttgtcaaagttggccgcgcagcatgagcaagctctcgta
gcgcaaaagcatcaattcgaattacgcattaaagcgctacaagcagaattagtacagctt
gctcaagtcgataaccaagcggcgaccaaaaataagaaacaactcagtcagcaagcgagc
aaagcgggtaatcacattgagttaaacgaagagttaacgcgggtgttgattgatcaacaa
ctgatagaagctggctggattgccgattcccaaagattagattttcgtaaaggcactcgg
ccagaaaaaggtaaaaaccttgcaatagccgagtggataacatggcataaaggtaaaaaa
ggtcgagccgactatgtgttgttttgcggcttaatccccgttgctgtggtagaagcaaaa
aaagaaaacacccacgttgccggtaaaatatcccaagccgagcgttactccaaaggctat
aaactgatagcgcctcaacaaggtgcatgggaaattgaaggccgcacagtagcatgggcc
gatgacgcagacggccattaccatatcccttttgtttattcctgtaatggccgcgagttt
aataagcaactggcagagttatcaggcacttggtttcgcgatacccgtaaacccagtaac
accaagcgggcgctgcaacagtttcactcgcctgatggcctgcttgataaattaaagcgc
agccgcgaagccgccgagcaaacacttcaacaagaaggctttgattacctcggtctgcgc
gattaccagcaaaaagctatcgcagctgtagagtcggctttagcgcaagataacactcag
tgtctgctggcaatggccacaggtacaggcaaaacccgcactattattggtttgatgtat
cgatttttaaaggccgagcgttttaggcgtatcttgttcctcgttgatagaaccgcattg
ggtgagcaagcgtgcgactcctttgacgaagccaagcttgagcaaaacaaagtgctgtcg
tctatctacaatattgccgagcttggcgatatgaaaagtgaagctgaaactcgcattcaa
gtcgcgacagtacaggccatggtcaaacggatttttatgtcggataacccgcccccgctg
gacgagtttgactgcattattgtcgatgaagcgcacagaggttatgccctagatcagcaa
atgaccgaaggtgaacttgccactcgcgatgccagccaatatctgtccagttatcggcgg
gtactcgattactttgatgcggtgcgtatcggcttaaccgcaacgcctgccaagcataca
agtgagattttcggtaaaccggtttacacctacagctatcgcgaagcggttgccggcgat
tggcttatcgaccatgagccaccgatccgctatgaaaccctgttaaacaaacacggcatt
aagtttgaaaaaggcgaaaccgtcacctccatcaacacccaaaccggtgaaattgaaacg
gccgatttagaagacgaattaaagttcgatgttgaatcctttaataaaagagtgattact
gagtcgtttaatgaagtcatctgccaagaattaatcaaagagttagacccttttggcgat
gagaaaaccatgattttttgtgcaaccgatgtgcatgcagacatggtaaaacgcttatta
gataaagcctttcttgatatgtatggcgatgactacaatcaagcggcagtggctaaaatt
accggtcaaagtgataaagtcagccagttgatacgccaatataaaaacgagcgttatcct
aatatcgccattactgttgacctattatcaaccggtatcgatgtgcctaagatttgtcat
ttagtgtttttacgtcgagtcaaatcacgcattctgtacgaacaaatgatgggccgtgcc
actcgccgctgtgacgacataggtaaaacggcttttaagatttatgatccggttgatatt
tacagcgcgcttgaagctgttaacactatgaagccgatagtgaaagatcccaacattacc
cttgagcagctggtggacgagttaactgacgatacctttttagaacgcgcacttaatacc
cctggtgaacaagtcggtgcaggtgcagatagtcacaccaatagccatgcccacgacgtg
cttaatcaacttgggcagaaagtgatgcgggtgatgcgaaaagcgactaaaaaagccgag
aataagccagagcttaaagccaagctcgagcaacttgaagagttatggggcgtagcacca
gcgaaactccaccagcatctacatcaaattggccccagagaggcggcacaattttttaag
cagcaccaaagtttgattaatcagttagccgaagtccgttatctggtgggtagcgacagt
atgccgctcatctatgaagggcgtgatgagttcatagagcgtcagcaaaattatggtata
cacgaaaagcccgctgattatcttgaaagcttcagtcacttcattaagcaaaacattaac
caatcagcagccttgtccgttgtggtaaatcgacctaaagatctcacccgagctcagcta
aaagaggtcaaattactgcttgatgaggcaggctatagcgaagcccacctgcaaagtgcg
tggcgtaaaaacaccaaccaagatatcgccgcgagtattatcggttatattcgccaagcc
gcattggatgaagccttaatcccctttgcccagcgggtgaataacgccatgcaacgcatt
tacagcgaacatgattggaacccaaatcagcgtaagtggctagaccgtctagcaaaacaa
ttggtgcatgaggctgtgattgataaagcctttgtgaataatcgttttgctagtgacggt
ggtgccaaacgctttaacagtgtactcaatgaccaactcgataccattttagacgagctc
aatgcctacctgtggcaagtgggttag

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