Shewanella oneidensis: SO_4318
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Entry
SO_4318 CDS
T00099
Symbol
aggC
Name
(GenBank) type I protein secretion system bifunctional ATPase and permease component AggC
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
son
Shewanella oneidensis
Pathway
son02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
son00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SO_4318 (aggC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_4318 (aggC)
02044 Secretion system [BR:
son02044
]
SO_4318 (aggC)
Transporters [BR:
son02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SO_4318 (aggC)
Secretion system [BR:
son02044
]
Type I secretion system
Adhesin protein transporter
SO_4318 (aggC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA_13
AAA
MMR_HSR1
AAA_22
AAA_23
DUF87
Motif
Other DBs
NCBI-ProteinID:
AAN57287
UniProt:
Q8E9G5
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All DBs
Position
4503574..4505754
Genome browser
AA seq
726 aa
AA seq
DB search
MPVTASEKVEQWTISASQRVIVDPLLDCLVLLTEHFGNPCSSDSLAAGLPLSGAVLTPDL
LPQAASRAGLAAKLSRKGLNEISPILLPCILLLKDKKACILREFDLESDRAVIQLPETGG
EEILTIESLETLYVGYLFLVKQEYRGDMGFDVYLHDNKTHWLVQTLKDSAPIYRDALIAS
VLVNIFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGASIAYLFDLVMRQLRSYLIDVAGK
KVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDSIREILTSATITTLVDLPFALFF
LIVIYIVAGDLAVIPVVGGMIIIGFTLYTQPKLKAAIEEGNKFSSLKHGHLIESLSALES
IKANGAEGIVQKSWQQMIGHSANWQLKSKKLSNSVSNTANFIVQFTVVCVVILGVYRVSD
NLISMGGIIAAVMLSSRAIAPMAQLAGLMTRANHTASALRQLNELMLQEDEFENKGHLVS
KQRLIGKINADHVGFSYPGSEKPVLHPLSLTINPGERIAIIGRNGSGKSTLAKLLVGLFQ
PTTGSLRYDGVDSAQIHPSDLRRNFGYLPQDVTLFHGTIRDNILFGTRQVTEHQLIRAVQ
LSGVSQFTHLEAEGLDQQVGEGGMSLSRGQRQTVALARATLNDPPVLLMDEPTASLDARA
EQQFIRSMQNVSKDRTLLLITHKMHLLQLVDRIIVLERGHVVADGPKAEVLEKLNFGLVN
GGAKNE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgttacagcgtctgaaaaggttgagcagtggacaatttctgcatcacagcgagtt
attgttgacccactgctagattgtttagtgcttcttactgaacattttggtaatccatgc
tcaagtgattcacttgcggcgggcttgcctttgtctggagcagtgttaacacccgatctg
cttccacaagcagcatctcgagcagggttagcggcaaaattatctcgtaaaggcttaaat
gagatatcgccaatattgctaccttgtattttgttattaaaagataagaaagcctgtatt
ctgcgagaatttgacctcgaatctgaccgtgcagtcatccaacttcctgagactggcggg
gaagaaatactcacaatagaatcgcttgaaactctgtatgtgggctatctattcctcgtt
aagcaagaatatcgtggcgacatggggttcgatgtctatttacacgacaataaaactcac
tggttagtccaaaccttaaaggactctgccccaatttaccgtgatgctttaattgcctcg
gttctcgtgaatattttcgcgttagtctcgccgctgtttatcatgaatgtgtacgataaa
gttgtacctaaccttgcatttgactccctgtgggtgttagcgattggtgcctctattgcc
tatttatttgaccttgttatgcggcaattaagaagctacttaattgatgtggcaggtaaa
aaagtagatatcatcgtatcatctcgcctctttgccaaagcaattggcataccgcttgaa
aaacgctcgcccagcatcggcgggatggctaaacaactgggtgaatttgatagcatccga
gaaattttaacctcagccaccataacgaccttagtcgatctgccctttgcgctctttttc
ctgatcgtgatttatattgttgctggcgatttagcggtgatacctgtggttggcggtatg
atcatcattggctttacactctatacccaacccaaattaaaagcggcgattgaggaaggt
aataagttttccagcttaaaacacgggcatttgattgagagcctatctgcacttgagtcg
attaaagccaacggcgctgaaggaattgttcaaaaaagctggcaacagatgatcggccac
agtgcaaactggcaattaaaatccaaaaaactctcaaattccgtatcgaatactgccaat
tttatcgtgcaatttaccgtagtatgcgtggttattttaggggtttaccgcgtttcagat
aacctaatttccatgggtgggatcattgctgcggtaatgttatcaagccgcgccattgca
ccaatggcacagttagctggattaatgacgcgggccaaccatactgccagcgcactgcgc
cagctcaatgagttaatgctgcaagaagacgagtttgaaaataaaggccacttagtcagt
aaacagcgtttaataggcaaaataaacgccgaccacgttggatttagttatccaggctct
gaaaaacccgtgcttcacccgctctcattaaccatcaatccaggtgagcgtattgcgatt
atcggccgcaatggttctggtaagagtaccttagccaaacttctcgtcggactcttccaa
ccaacaactggtagcctacgttacgatggtgtcgattcggcgcaaattcatcctagcgat
ctacgccgtaattttggttatttgccgcaggatgtcaccctatttcatggcacgatcaga
gataacattctctttggtactcgccaagtgacagagcatcagcttatccgtgcggtgcag
ctttcaggtgtcagtcaatttacgcacttggaagctgaaggcctagatcaacaggttggt
gaaggtggaatgtctcttagccgcggacaacggcaaaccgtcgcccttgcccgagcgacc
cttaatgacccacccgtattgttgatggatgagcctactgcgagtttagatgctcgggca
gaacaacagtttattcgctcaatgcaaaatgtcagcaaggatagaactctgctgctaatc
actcacaaaatgcatttattacaattggttgaccgtattattgtgcttgaaaggggccat
gttgttgctgatggtcctaaagctgaagtgttggaaaaactcaattttggccttgttaac
ggaggcgctaaaaatgagtaa
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