Shewanella oneidensis: SO_4326
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Entry
SO_4326 CDS
T00099
Symbol
vexR
Name
(GenBank) transcriptional repressor of multidrug/detergent efflux pump VexR
KO
K18136
TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
Organism
son
Shewanella oneidensis
Pathway
son01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
son00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SO_4326 (vexR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
son03000
]
SO_4326 (vexR)
Transcription factors [BR:
son03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SO_4326 (vexR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_HI_0893_C
TetR_N
TetR_C_10
HTH_Tnp_1_2
TetR_C_24
HTH_3
HTH_Tnp_4
DUF6445
Motif
Other DBs
NCBI-ProteinID:
AAN57295
UniProt:
Q8E9F7
LinkDB
All DBs
Position
4517842..4518408
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AA seq
188 aa
AA seq
DB search
MDSKRDLILRSAEKIIATEGLHNLSMQKLAVDAGVAAGTIYRYFKDKEDLIIKLRKDVLQ
QIASKLLENIDEGSFDEKFRRLWFNIVELGREQSHANLSFAQYSHLPGVDAPEHQAFERE
IFQPLHQLFEQAKGQGVIQPLNNALLFSIAFEPAVAIAKRLRRGHLQCTEHEIQQACELC
LQAISVTL
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaacgcgatttgatacttcgctctgccgaaaaaattattgctacagaaggc
ttacataacctttcaatgcaaaaattagcggtggatgcaggcgttgccgcaggtacgatc
taccgctacttcaaagacaaagaagatttgatcattaagctgcgtaaagacgtattacaa
caaattgccagcaagttgcttgaaaacattgatgaaggcagctttgacgaaaaatttcgc
cgcctgtggttcaacattgttgaactaggccgcgagcagtcacatgctaatttgagtttt
gctcagtactctcacctccccggtgttgatgcacctgagcaccaagcttttgaaagagaa
atatttcaaccactacaccaactgtttgaacaggcgaaaggccaaggcgtaatccaacca
ttgaataatgccttgttattttctatcgcctttgaaccggctgtcgccatagctaaacgt
ctacgccgaggccatttgcaatgtacagaacatgaaatccagcaggcatgtgaattatgc
cttcaggcaatttctgtgactctttaa
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