Shewanella oneidensis: SO_4567
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Entry
SO_4567 CDS
T00099
Name
(GenBank) transcriptional regulator AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
son03000
]
SO_4567
03036 Chromosome and associated proteins [BR:
son03036
]
SO_4567
Transcription factors [BR:
son03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
SO_4567
Chromosome and associated proteins [BR:
son03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SO_4567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
MarR
HTH_20
HTH_11
HTH_5
NirdL-like_HTH
HTH_36
UPF0122
HTH_IclR
HTH_CodY
HVO_A0114
HTH_27
HTH_28
HTH_34
HTH_Cmi2_C
HTH_1
LexA_DNA_bind
TrmB
Zn_ribbon_Com
HTH_23
Rrf2
HTH_Crp_2
Fe_dep_repress
HTH_40
DUF7342
HTH_9
HTH_30
MarR_2
GcrA
DUF7959
HTH_63
Tai4
HTH_10
HxlR
wHTH-PRTase_assc
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AAN57528
UniProt:
Q8E8T9
LinkDB
All DBs
Position
4763027..4763458
Genome browser
AA seq
143 aa
AA seq
DB search
MDKFDTAIIHCLRQDARQSVSSIAEQVNLSRSAVAERIKKLEQTGVIRGYQVLLSESQKE
GVSAYFEIQHKCPRCADVVHVFHAIPEVITCRGISGDMDLLVYVHAPSMRRLHEIREYID
THTDIIKIKTHVVMSEWINNTGE
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
ttggataagtttgataccgcgatcatccattgtctgcgccaagatgctcgtcaaagtgtt
tcaagtattgctgaacaagtaaatctttcccgaagtgctgtcgcggagcggattaaaaag
ctggaacaaacaggggttatccgtggctatcaggtattgctgagtgaatcgcaaaaagaa
ggcgtttcggcctacttcgaaatccaacataaatgtccgcgctgcgctgatgtagtgcat
gtgttccatgcgattcctgaagtgattacctgccgcggtatttctggtgatatggatttg
ctggtgtatgttcacgccccttcgatgcgccgcttgcatgaaattcgtgagtatattgat
acccacacggatatcattaaaatcaaaacccatgtggtcatgagtgaatggattaataat
actggcgagtaa
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