Shewanella oneidensis: SO_4726
Help
Entry
SO_4726 CDS
T00099
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase MutM
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
son
Shewanella oneidensis
Pathway
son03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SO_4726 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_4726 (mutM)
Enzymes [BR:
son01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SO_4726 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SO_4726 (mutM)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SO_4726 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Motif
Other DBs
NCBI-ProteinID:
AAN57685
UniProt:
Q8E8D9
LinkDB
All DBs
Position
4930407..4931222
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVEVTRQGITPYLVDQTVVDLIVRNPSLRWPVPELAKQIIGQTIRQVRRRAKYLL
IDTDAGTSIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRILRFNDPRRFGAWLWCQLP
EEAHPLLEKLGPEPLTDAFNVNQLAASLAGKKKAIKLCLMDNHIVVGVGNIYANEALFAA
GIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR
GGETCTQCGNLLSEIRLGQRTTVFCSICQPR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtcgaagtcacgcgtcaggggataaccccttacttagtcgat
caaaccgtggttgacctaatcgtgcgtaacccctccctgcgttggccagttcctgagctt
gccaaacagatcattggccaaaccatacgccaagtgcgccgccgcgctaagtatctgtta
atcgatacggatgctggcaccagcatagtgcatttggggatgtcgggcagcctaaggatc
ctgccccatgacacgccagtggagaagcatgaccatatcgatctcgttctcgccaatggc
cgcattctgcgctttaacgacccaagacgcttcggcgcttggttatggtgccaattgcca
gaggaagcccatccgctgctggaaaaactcgggccagaacctctgaccgatgcctttaac
gttaatcagttagctgcctcgctggcgggcaagaaaaaggccatcaagctctgtctgatg
gataaccatattgtggtgggcgttgggaatatttacgccaatgaagcactgtttgccgca
ggaatacaccccgaggccgaggcaggcaagatagatattgaacgcttaacggtactggtt
gctgaggtaaaacaaatcctcgcccacgccatcaagcaaggcggcaccacgcttaaggac
ttcaccaacgctgacggtaaacccggctatttcgcgcaaaagctgcatgtatacggccgc
ggcggcgaaacctgtacacagtgtggtaatttacttagcgaaatccgtttaggccaacgt
accaccgtattttgtagtatctgccaaccccgctaa
DBGET
integrated database retrieval system
