KEGG   Shewanella oneidensis: SO_A0049
Entry
SO_A0049          CDS       T00099                                 
Name
(GenBank) ABC-type bacteriocin export system multifunctional permease/ATPase/protease component
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
son  Shewanella oneidensis
Pathway
son02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:son00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SO_A0049
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:son01002]
    SO_A0049
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:son02000]
    SO_A0049
   02044 Secretion system [BR:son02044]
    SO_A0049
Peptidases and inhibitors [BR:son01002]
 Cysteine peptidases
  Family C39
   SO_A0049
Transporters [BR:son02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    SO_A0049
Secretion system [BR:son02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   SO_A0049
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_29 DUF87 AAA_16 AAA_22 AAA_25 AAA_14 MobB Mg_chelatase AAA_28 AAA_5 RsgA_GTPase AAA_19 NB-ARC UCP018868 AAA_RNF213_3 DUF3481 RNA_helicase
Other DBs
NCBI-ProteinID: AAN52985
UniProt: Q8E874
LinkDB
Position
megaplasmid:complement(38936..41113)
AA seq 725 aa
MTIATDKHAALMASESNSPVDLLEFSGNKRVPLILQAEMAECGLACMAMIASFNGHKLDM
AALRKRFTANLKGMNLQQLISLGDSIGLSSRALKCPLEEVGKLALPCILHWDMNHFVVLT
GVTKKSISINDPAAGKRTLSLQEFAKHFTGIALELTPTKAFVKQDERQQMRLSQLWTKIS
GVNAALITLLLLSVLLQVFALVTPYYMQWVVDEVLVSQDQPLLIVLAIGFGLLVVINVFT
TGVRSWLVLRVSSLLNMQMGVNLLRHLLRLPMNYFEKRHIGDLVSRFGSLAQVRERLTTG
LVETVVDGVMSIAVLVMMLIYSVKLTLVVMAAVALYTLMRFALYRPLHRATEESIQAKAK
EQSNFLENIRGIQTIKLFTCESARQGIWQNRYSEVINADIRLGRLKISFDAMNKLLFGVE
NIIVIYMAAMIVMSGGLTIGMVLAFIAYKNQMTERVASLIEQLIMFRMLRLHLDRISDIA
LHEQEAHQEGFTPLNVVKGRLSLENVSFRYGENEPEVVSNLSLDIQAGESVAIVGASGCG
KTTLVKLMLGLLVPSSGRILLDGQAIQQIGLTQYRQQIAAVMQDDTLLSGSIADNITFFD
PEPNYVKMQQCAQLAVIDMDIAHMPMGYNSLVGDMGNQFSGGQVQRLLLARALYQSPSIL
FMDEATSHLDIMNEAKISEQIKNLNMTRIIIAHRPETIKQADRVVVMHQGKIMTAEELQQ
AQSAS
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgacaattgcaactgacaaacatgccgccttgatggcaagcgagagcaatagtcccgtt
gacttacttgagttctctggcaataagcgtgtgccacttattttacaagctgaaatggcg
gaatgcggtcttgcctgtatggcgatgatagcaagcttcaacggtcacaagttagacatg
gcggcgttacgcaagcgcttcaccgctaatttaaaagggatgaatttacagcagttaatt
tcattaggtgattctattggactctccagtcgagcgctcaagtgcccgttggaagaggta
ggtaagttagcactaccttgtattctccattgggatatgaatcactttgttgtactcact
ggtgtcactaaaaaaagcatcagcataaatgaccctgctgctggtaaacgcaccttatcg
ctgcaggaatttgctaaacattttacaggaattgcacttgagttgacaccgacgaaggcg
tttgtaaaacaagatgaacgccagcaaatgcgattaagccaactgtggaccaaaatcagt
ggcgttaacgcagcgttgataacattgctgctcttatccgtattattacaggtatttgcg
ttagtcacgccttattacatgcaatgggtggttgatgaggtattggtgagtcaggaccag
cctttgctgattgtgctagccattggcttcgggctgttggtggtgataaacgtgtttacc
accggtgtgcgcagctggctagtgttaagggtttctagcctattgaatatgcaaatgggg
gttaatttactgcgccatctattgcgcttacccatgaactattttgaaaagcggcatatt
ggtgatttagtgtcgcgttttggctctttggcacaagtacgtgagcggctaacgacaggc
ctagttgaaacggttgttgatggagtcatgtccattgcggttttagtgatgatgctgatt
tacagtgtaaaactcacgcttgtcgtcatggctgctgtggcattgtataccttgatgcgt
ttcgcattatacaggccacttcatcgagccacagaagagtcgattcaagcaaaagcaaaa
gagcaaagtaactttttggaaaatatccgaggtattcaaaccatcaagttatttacctgt
gaaagcgctaggcaaggtatttggcaaaatcgctacagtgaagtcatcaatgctgacatt
cgtttaggtaggctaaaaatcagcttcgatgcaatgaacaaactgttgtttggagttgaa
aatatcattgtgatttacatggcggcaatgattgtcatgagtggtggcctcaccatcggc
atggtattagcctttattgcttacaaaaatcaaatgactgagcgagtggcaagcttaatt
gaacagttaattatgtttcgtatgttgcgattacaccttgaccgtatctctgacattgct
ctccacgagcaagaggctcatcaagaaggctttacaccgctcaatgttgtcaaagggcgc
ttaagtttagagaacgtaagctttcgttatggtgaaaatgagcccgaggtggttagcaac
ctgagcctcgatattcaggcgggagaatctgtcgctatagtgggggcttctggttgtggc
aagaccaccttagtgaaactgatgctagggctattagtcccctcgagtggacgtattttg
ctcgatggccaagcgatacaacagattggattaacacaatatcggcagcaaatcgcagcc
gttatgcaggacgatactctgctttcaggctcgattgctgacaatattacgtttttcgac
cctgagcctaattacgtaaaaatgcaacaatgtgcacaattggcggtgattgatatggat
atcgcacatatgcccatggggtataacagtttagtgggcgatatggggaatcagttttcg
ggtgggcaagtacagcgtttattgctagcacgagccttatatcagtcaccctcgattttg
tttatggatgaagctacaagtcatctcgacattatgaatgaggctaaaatcagtgagcag
ataaaaaacctaaatatgacccgcattatcattgcccatagaccagaaaccattaagcag
gcagatagagtggttgtgatgcatcaagggaaaataatgactgctgaagaattacagcaa
gcccagtccgcgtcataa

DBGET integrated database retrieval system