Schaalia odontolytica: FBF35_00035
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Entry
FBF35_00035 CDS
T05977
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soo03032
]
FBF35_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_00035 (gyrA)
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FBF35_00035 (gyrA)
DNA replication proteins [BR:
soo03032
]
Prokaryotic type
DNA Topoisomerases
FBF35_00035 (gyrA)
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FBF35_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
QCT34566
LinkDB
All DBs
Position
8382..11012
Genome browser
AA seq
876 aa
AA seq
DB search
MSDEQTTDARHISDTERIRQVDLQKEMQRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLY
AMYDGGYRPTSSFSKSSRVVGEVMGNYHPHGDAAIYDALARLVQPWSLRYPLVAGQGNFG
TPGNLGPAAPRYTECKMAPLAMEMVRDIDEECVDFQDNYDGRNQEPTILPARFPNLLANG
SEGIAVGMATRIPPHNLRELARGVEWALEHPEASREELLEALIKLIPGPDFPTGATILGH
KGIEDAYRTGRGSITQRAVVNVEEIQGRQCLVVTELPYQVNPDNLADKIAQLVRDGAIGG
IADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKRTSLQENFSANMLALVDGVPRTLSI
DGFIRHWINHQIDVIVRRTKFRLRKALERLHILEGYLKALDALDEVIALIRRSPTVDEAR
AGLIELLDVDAVQADAILALQLRRLAALERQKIMDEHAELKARVDDLNDILAKPERQRAI
ISAELGEIVDKFGDERRTRILPFDGEMSMEDLIPEEDVVVTITRDGFAKRTRTDNYRSQK
RGGKGVRGTQLRGDDVVEHFFVTTTHNWLLFFTNLGRVYRAKAYEIPEGGRDAKGQHVAN
LLAFQPDEHIAQVLAIRTYEDADFLVLATKRGLVKKTPLSLYNSPRSGGIIAINLREDED
GKPDELVSAQTIMADEDLILVSRDGQAVRFTATEDQLRSMGRSTSGVRGMKFRGDDELLS
MEVPRENTDLLIVTESGYAKRTPVEEYPTKSRGTLGVRVGKLVDERGGLVGALVVRPDED
VMVITESGKLVQVNASDVRPTARNTMGVIFARPDDGDRIIAITRNSDSGDEDETDESENT
EAVEGAEGAEVAEATDAPADEASAPAGGDDTADADK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagcagactactgacgcgcggcacatctcggacaccgagcgcatccgccag
gtcgacctgcaaaaggagatgcagcgctcctacctcgactacgccatgagcgtcatcgtc
gggcgcgccctgcccgacgtgcgcgacggcctcaagcccgtccaccgccgcgtcctgtac
gccatgtacgacggcggataccgccccacctcctcgttctccaagtcctcccgcgtcgtc
ggcgaggtcatgggtaactaccacccccacggcgacgctgcgatctacgacgccctcgcg
cgcctcgtgcagccctggtcgctgcgctacccgctcgtcgccggtcagggtaacttcggt
acccccggcaacctgggccccgccgcaccccgttacaccgagtgcaagatggcgcccctg
gccatggaaatggtccgcgacatcgacgaagaatgcgtcgatttccaggacaactacgac
ggccgcaaccaggaacccaccatcctgcccgcgcgcttcccgaacctcctggccaatggc
tccgaaggcatcgccgtcggcatggccacccgcatcccgccgcacaacctgcgcgagctc
gcgcgcggcgtcgaatgggccctcgagcaccccgaagcctcccgcgaagagctcctcgaa
gcgctcatcaagctgatccccggacccgacttccccaccggcgccaccatcctgggccac
aagggcatcgaagacgcgtaccgcaccggccgcggctccatcacgcagcgcgccgtcgtc
aacgtcgaggagatccagggccgtcagtgcctcgtcgtcaccgagctgccctaccaggtc
aaccctgacaacctggccgacaagattgcccagctcgtgcgcgacggagcgatcggcggc
atcgccgacatccgcgacgagacatccggccgcaccggccagcgcctcgtcatcgtcctc
aagcgcgacgccgtcgccaaggtcgtcctcaacaacctctacaagcgcaccagcctgcag
gagaacttctccgccaacatgctcgcgctcgtcgacggcgtgccccgcaccctgtcgatc
gacggcttcatccgccactggatcaaccaccagatcgacgtcatcgtgcgccgcacgaag
ttccgcctgcgcaaggccctcgagcgcctgcacatcctcgaaggctacctgaaggccctc
gacgccctcgatgaggtcatcgccctgatccgccgctcccccacggtcgacgaggcccgc
gccggcctcatcgagctgctcgacgtggacgccgtccaggccgacgccatcctggccctt
cagctgcgccgcctggccgccctcgagcgccagaagatcatggatgagcacgccgaactc
aaggcccgtgtcgacgaccttaacgacatcctcgccaagcccgagcgtcagcgcgccatc
atctccgccgaactcggcgaaatcgtcgacaagttcggcgacgagcgccgcacccgcatc
ctccccttcgacggggaaatgtcgatggaagacctcatccccgaagaggacgtcgtcgtc
accatcacccgcgacggcttcgccaagcgcacccgcacggacaactaccgctcgcagaag
cgcggcggcaagggcgtgcgcggcacccagctgcgcggcgacgacgtggtcgaacacttc
ttcgtcacgaccacgcacaactggctgctcttcttcaccaacctcggccgcgtctaccgc
gccaaggcctacgagatcccggagggcggtcgcgacgccaagggccagcacgtcgccaac
ctgctggccttccagcccgacgagcacatcgcacaggtcctcgcaatccgcacctacgag
gacgcagacttcctggtcctggccaccaagcgcggcctcgtcaagaagaccccgctgagc
ctgtacaactcgccccgctccggcggcatcatcgccatcaacctgcgcgaggacgaggac
ggcaagcccgacgagctcgtctccgcacagaccatcatggccgacgaagacctcatcctc
gtctcccgcgacggccaggccgtgcgcttcaccgccaccgaagaccagctgcgctccatg
ggccgctccacgtccggcgtgcgtggcatgaagttccgcggcgacgacgaactgctcagc
atggaggtcccgcgcgagaacaccgacctgctgatcgtcaccgagtccggctacgccaag
cgcacccccgtcgaggaatacccgaccaagtcgcgcggcaccctcggcgtgcgcgtcggc
aagctcgtcgacgaacgcggcggcctcgtcggcgccctcgtcgtccgacccgatgaagac
gtcatggtcatcaccgagtctggcaagctcgtccaggtcaacgcctccgacgtgcgaccc
accgcccgcaacaccatgggcgtcatcttcgcccgcccggacgacggcgaccgcatcatc
gcgatcacccgcaactccgactcgggcgacgaggacgagaccgacgagtccgagaacacc
gaggctgtcgagggcgctgagggcgcggaggttgctgaggcgaccgacgcccccgcggac
gaggcctcggcccccgctggcggtgacgataccgcagacgctgacaagtga
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