Schaalia odontolytica: FBF35_01205
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Entry
FBF35_01205 CDS
T05977
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soo03032
]
FBF35_01205 (topA)
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_01205 (topA)
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FBF35_01205 (topA)
DNA replication proteins [BR:
soo03032
]
Prokaryotic type
DNA Topoisomerases
FBF35_01205 (topA)
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FBF35_01205 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QCT34761
LinkDB
All DBs
Position
269368..272112
Genome browser
AA seq
914 aa
AA seq
DB search
MSATKLVIVESPAKAATIEGYLGPDYHVTASIGHIRDLPQPSELPKDMKKGPFGRFAVNV
DDGFKPYYVVNPDKKKKVTELKKLLKECDELYLATDEDREGEAIAWHLLQVLKPKVPVRR
MVFHEITKEAIQRALENTRDLDTALVDAQETRRILDRLYGYEVSPLLWRKIRPSLSAGRV
QSVATRLVVARERERMAHVSAQYWSIDTAFTSAGQAFGARVSSVDGHSIATGSDFSEKGE
LSAKAAKAGVLHLDEATARAYAQALSDAPASVIDSVTRKPYRRRPAAPFTTSTLQQEASR
KLHWNASSTMRTAQSLYESGYITYMRTDSTALSSQAIHAAREQATQLYGAEAVAESPRLY
GTTSKGAQEAHEAIRPAGDHFRTPGEVAGSLSKQQLALYDLIWKRTVASQMADALGYTAT
IRVLTGIEVDGKRHDVLSSASGTVITSPGFRLAYQEGRDQGRYDAEKNDAEKTLPDVAEG
DPATLTEATPDGHETQPPGRYTEATLVKTMEELGIGRPSTYAATIQTIGDRGYVTHRGQY
LVPTWLAFSVTRLLEENLANLVDYDFTASMEGDLDRIAAGEENGTEFLTGFFFGPDGTGE
NGGLRHDVASLGDDIDARAVNSIDLGRGVTLRVGRYGPYMEKADGTRANVPPEVAPDELT
DELIDQLFSRAADDGRELGVDPATGHTIIVKDGRYGPYVTEVLPEETEGAEEGAKKTKKA
AAKPRTASLFKTMDIATVTLEDALALLSLPREVGTDPASGEVITAQNGRYGPYLKKGTDS
RTLASEDQLLTITLDEALAIYAQPKTRGRGTARPPLREFGEDPISGKKVTVKDGRFGPYV
TDGETNVTVPRAETVEDLTAERAYELLADKRAKGPAPKRTRKTAAKKTTTKKTSAKKTTA
KKTATKKAATKKDS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgacgaagctcgtgatcgtggagtctcctgcgaaggcagccaccatcgaggga
tacctgggtcccgactaccacgtgaccgcctccatcggccacatccgcgacctcccgcag
ccctccgagctgcccaaagacatgaagaaggggccgtttggtcgctttgccgtcaacgtg
gatgatggctttaagccctactacgtggtgaacccggataagaagaaaaaggtcaccgaa
ctcaagaagctcctcaaggagtgcgacgaactctatctggcaactgatgaggaccgcgag
ggtgaggccatcgcgtggcacctcctgcaggtcttgaagccgaaggttcccgtgcgtcgc
atggtgttccacgaaattacgaaagaagcgatccagcgcgcgctggagaacacgcgcgac
ctggacaccgccctcgtggacgctcaggagacccgccgcatcctcgaccgcctctacggc
tacgaggtctcgcccctcctgtggcgcaagatccgcccgtccctgtccgccggccgcgtg
cagtcggtggccacgcgcctcgtggtcgccagggaacgtgagcgcatggcgcacgtgagc
gcccagtactggtcgatcgacacggcgttcacgtcggcgggccaggccttcggcgcgcgc
gtctcctccgtggatggccactcgatcgcgaccggctccgacttttccgagaagggcgag
ctgagcgcgaaggcggccaaggccggcgtcctccacctggacgaggccacggcccgcgcc
tacgcgcaggctctgtcggatgccccggcctcggtcatcgactcggtgacccgcaagccc
taccgtcgccgcccggcagcccccttcacgacgtcgaccctccagcaggaggcgtcgcgc
aagctgcactggaacgcgtcctcgacgatgcgcaccgcccagtccctctacgagtccggt
tacatcacctacatgcgtaccgactccacggcgctgtccagccaggcgatccacgccgcc
cgcgagcaggccacccagctctacggggccgaggctgtggccgagtccccgcgcctgtac
ggcaccacgtccaagggcgcccaggaggcgcacgaggcgatccgtcctgcgggtgatcac
ttccgcacgccgggcgaggtggccggttctctgtcgaagcagcagctggcgctgtacgac
ctgatctggaagcgcacggttgcctcgcagatggccgacgctctcggctacacggcgacg
atccgcgtgctcaccggcatcgaggttgacggtaagcgccacgacgtgctgtcctcggcc
tcgggcacggtcatcacctccccgggcttccgcctggcctaccaggagggccgcgaccag
gggcgttacgacgcggaaaagaacgacgcggagaagaccctcccggacgtcgctgagggt
gatcccgcgacgctgaccgaggccacccccgacggccacgagacccagcccccgggccgc
tacacggaggccacgctggtcaagaccatggaggagctcggtatcggccgtccctccacc
tacgcggccaccatccagacgatcggtgaccgcgggtacgtgacgcaccgcggccagtac
ctggtgcccacgtggctggcgttctccgtgacgcgcctgctcgaggagaacctggcgaac
ctggtcgactacgacttcacggcctcgatggagggcgacctggaccgtatcgccgcgggc
gaggagaacggcacggagttcctgaccggcttcttcttcggccccgacggcacgggtgag
aacggcggtctgcgccacgacgtcgcctccctgggcgatgacatcgacgcgcgcgccgtc
aactcgatcgacctgggccgcggcgtgacgctgcgcgtgggtcgctacggcccctacatg
gaaaaggccgacgggacgcgcgcgaacgtgccaccggaggtcgctcccgacgagctgacg
gatgagctgatcgaccagctcttctcccgcgccgccgacgatggccgtgagctgggcgtc
gaccccgcgaccggtcacacgatcatcgtcaaggatggccgctacggcccctacgtcacc
gaggtcctgcccgaggagactgagggcgccgaggaaggcgcgaagaagacgaagaaggct
gccgccaagcctcgcaccgcctcgctgttcaagaccatggacatcgcgaccgtcaccctc
gaggacgccctggcgctgctgtccctgccgcgcgaggtaggcacggacccggcctcgggc
gaggtcatcacggcgcagaacggccgctacggcccctacctgaagaagggcacggactcg
cgcacgctggcctccgaggaccagctgctgaccatcaccctggacgaggccctggccatc
tacgcccagcccaagacgcgcggccgcggcacggcccgcccgccgctgcgcgagttcggc
gaggacccgatctcgggcaagaaggtcaccgtcaaggacggccgcttcggcccctacgtg
acggatggcgagaccaacgtgacggtgccgcgcgccgagacggtggaggacctgacggcc
gagcgcgcctacgagctgttggcagataagcgcgccaagggccccgcccccaagcgcacg
cgcaagacggccgcgaagaagacgacgaccaagaagacgagcgcgaagaagaccaccgcg
aagaagacggccaccaagaaggccgcgacgaagaaggacagctga
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