Schaalia odontolytica: FBF35_01270
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Entry
FBF35_01270 CDS
T05977
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soo02000
]
FBF35_01270
Transporters [BR:
soo02000
]
Other transporters
Pores ion channels [TC:
1
]
FBF35_01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QCT34773
LinkDB
All DBs
Position
complement(283143..284354)
Genome browser
AA seq
403 aa
AA seq
DB search
MIITRRTLTASALVAATTLALGACGSSKPQTPAAAPTAEATTAAPTQSTTPASVPTVPGY
RPGEIPPIPLFSVPAIDVFASNADKAVVQAASSSLASVPGVTVSPAKCDGTSLVSGSTVL
GGDGSAVSSSDKGTVVNDGTGSGVITEGPISIIYGGDGSGTYTNADTMVTITVEADGSGT
YSTTTTSIILDGNGGGNYSNTTSMETIINKGDGSGQFSKGTVTIINNGDGTGSYSDEKLT
IQNNGNGTATVNGVTVNDAPKVEKVGKLGKFPAVGSLKPVESCGTVITLEDGVLFDFGKS
DIRPEAAQTLKSLAGVLNNAKVPTAHIYGHTDSISDEAFNLQLSQERADAVSAELKKDGV
SAILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFIPAF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcacacgacgcaccctgacagcctccgctctcgtcgctgcgaccacgctcgcc
ctgggcgcctgcggctcctcgaagccccagactcccgcggctgcgcccaccgccgaggcc
accacggctgcccccacccagtccacaactcccgcctcggttccgacggtcccgggttac
cgccccggcgagatccccccgatcccgctcttctcggttcccgcgatcgacgtgttcgcc
tcgaacgcggataaggccgtcgtccaggcagcctcctcgtccctcgcttccgttcctggc
gtgacggtctcccccgccaagtgcgacggcacctccctggtgtccggctcgacggtcctg
ggcggcgacggctccgccgtttcctccagcgataagggcacagtcgtcaacgacggcacc
ggctccggcgtcatcaccgagggccccatctccatcatctacggcggcgacggctcgggc
acctacaccaacgccgacaccatggtgaccatcaccgtcgaggccgacggctcgggcacc
tactccacgacgacgaccagcatcatcctggacggaaatggcggcggcaactactccaat
acgacctccatggagacgatcatcaacaaaggtgacggctccggccagttctccaagggc
accgtcacgatcatcaacaacggcgacggcaccggcagctactcggacgagaagctgacg
attcagaacaacggcaacggcacggccaccgtgaacggcgtgaccgtcaacgacgctccg
aaggtcgagaaggtcggcaagctcggcaagttcccggccgtcgggtccctcaagcccgtc
gagtcctgcggcacggtcatcaccctggaggacggcgtcctctttgacttcggcaagtcc
gacatccgccccgaagctgcccagaccctgaagagcctggcgggcgtgctcaacaacgcg
aaggttcccaccgcccacatctacggccacaccgattccatctcggacgaggccttcaac
ctccagctctcgcaggaacgcgcggatgccgtgtccgcggaactgaagaaggacggcgtg
agcgccatcctcgatgccaccggctacggcgagtcgaagcccgtcgcgcccaacgagaac
gccgatggctcggacaacccggccggccgcgcgctcaaccgccgcgtcgagatcttcatc
cccgccttctag
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