Schaalia odontolytica: FBF35_02350
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Entry
FBF35_02350 CDS
T05977
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
soo
Schaalia odontolytica
Pathway
soo00450
Selenocompound metabolism
soo00970
Aminoacyl-tRNA biosynthesis
soo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FBF35_02350
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FBF35_02350
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
soo01007
]
FBF35_02350
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soo03016
]
FBF35_02350
Enzymes [BR:
soo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
FBF35_02350
Amino acid related enzymes [BR:
soo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FBF35_02350
Transfer RNA biogenesis [BR:
soo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FBF35_02350
Prokaryotic type
Other AARSs
FBF35_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
tRNA-synt_1f
Anticodon_3
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QCT34955
LinkDB
All DBs
Position
546435..548276
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AA seq
613 aa
AA seq
DB search
MSRILSAVAWPYANGPRHIGHVAGFGVPSDVFSRYMRMAGHDVLMVSGTDEHGTPILVAA
DGAGVSARELADQNNRLIVEDLVALGLSYDLFTRTTAGNHYRVVQDMFATVRDNGYMIEQ
VTRAAISPSTGRTLPDRYIEGTCPICGAEGARGDQCDNCGNQMDPTELINPHSRINGETP
NFVESTHYFLDLPALAEALSAWLDEREKSGTWRPNVIKFSQNFLEDIRPRAMTRDIDWGI
PVPGWEDQPTKRLYVWFDAVIGYLSASIEWARRTGDPEAWRKWWNDPEALSYYFMGKDNI
VFHSQIWPAELLGYNGQGAKGGAPGDLGVLNLPTEVVSSEFLTMEGKKFSSSHGIVIYVR
DFLSRYQADALRYFISAAGPETSDSDFTWAEFVRRTNGELVAGWGNLVNRTASMIAKKFG
EIPTPGELEDIDRALLDAVEAGFETVGNLIRHHRQKAALSEAMRLVGEANKYVTDTEPFK
LKAPEQQERLATVLWTLAQAVTDLNLMLSPFLPHAANDIDRVMGGTGEIAPMPYIEEVAE
LDPQVLPANFEGRDGYPIITGDYTNVPTWERHPITVGTPIAKPTPVFVKLDESIVEEELA
RYADAHPDDVTGA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtattctgtccgccgtcgcatggccctacgccaacggcccccgtcatattggc
cacgttgcgggattcggtgtcccctccgacgttttctcccggtacatgcgaatggccggc
cacgacgtcctcatggtgtccggcaccgatgaacacggcacccccatcctggtggccgcc
gacggcgccggcgtgagcgcccgcgaactcgcagaccagaacaaccgcctcatcgtcgag
gacctcgtggccctgggcctgtcctacgacctcttcactcgcacgaccgccggcaaccac
taccgtgtcgtccaggacatgttcgccaccgtgcgcgacaacggctacatgatcgagcag
gtcacccgcgccgcgatctccccgtccaccggccgcaccctgcccgaccgctacatcgag
ggcacctgcccgatctgcggcgccgaaggagcgcgcggcgaccagtgcgataactgcggt
aaccagatggacccgaccgagctcatcaacccgcactcgcgcattaacggcgagaccccc
aacttcgtggagtccacccactacttcctcgacctgcccgccctggccgaggccctgtcc
gcctggctcgacgagcgcgagaagtccggcacctggcgtcccaacgtcatcaagttctcc
cagaacttcctcgaggacatccgcccccgcgccatgacgcgcgacatcgactggggtatc
ccggtccccggctgggaagaccagcccaccaagcgcctctacgtgtggttcgacgccgtc
atcggctacctgagcgcctccatcgagtgggcgcgccgcaccggcgaccccgaggcctgg
cgcaagtggtggaacgaccccgaggccctgtcctactacttcatgggcaaggacaacatc
gtcttccactcccagatctggcccgccgagctgctcggctacaacggccagggcgcgaag
ggtggagctcccggcgacctgggcgtcctcaacctgcccaccgaggtcgtctcctccgag
ttcctcaccatggagggcaagaagttctcctcctcgcacggcatcgtcatctacgtgcgc
gatttcctctcgcgttaccaggccgacgccctgcgctacttcatcagcgccgccggcccc
gagacctcggactccgacttcacgtgggctgagttcgtgcgccgcaccaacggcgagctc
gtcgccggttggggcaacctggtcaaccgcaccgcctccatgatcgccaagaagttcggt
gagatccccacccccggtgagctcgaggacatcgaccgcgccctcctggatgccgtcgag
gccggttttgagaccgtcggcaacctgattcgccaccaccgccagaaggcggcgctgtct
gaggccatgcgcctggtcggcgaggccaacaagtacgtgaccgacaccgagcccttcaag
ctgaaggcccccgagcagcaggagcgcctcgcgacggtcctgtggaccctggcccaggcg
gtcacggacctcaacctcatgctctccccgttcctgccccacgcggccaacgacatcgac
cgcgtcatgggcggcacaggcgagatcgcgccgatgccctacatcgaggaggtcgccgag
ctcgacccgcaggtcctgcccgccaacttcgagggccgcgacggctacccgatcatcacg
ggcgactacacgaacgtcccgacctgggagcgccacccgatcacggttggtaccccgatc
gccaagcctacgccggtgttcgtgaagctggatgagtccattgtcgaggaggagcttgcc
cgctacgcggacgctcaccccgacgatgtgacgggtgcctga
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