Schaalia odontolytica: FBF35_02405
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Entry
FBF35_02405 CDS
T05977
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
soo
Schaalia odontolytica
Pathway
soo03420
Nucleotide excision repair
soo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FBF35_02405
03430 Mismatch repair
FBF35_02405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_02405
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FBF35_02405
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FBF35_02405
MMR (mismatch excision repair)
Other MMR factors
FBF35_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
AAA_11
DEC-1_C
Motif
Other DBs
NCBI-ProteinID:
QCT34965
LinkDB
All DBs
Position
561885..564716
Genome browser
AA seq
943 aa
AA seq
DB search
MSDSTSLPDLGFLIGPDGGFQDDYVPPEVPAFDVEDALGSDGWPEIAVPGGASGAPSAWE
PPASSGGFSSGWERPARPGVDPESLTRGLNDRQREAVTHAGSPLLILAGAGSGKTRVLTH
RIAYLLATGRARAGEILAITFTNKAAAEMRERAGALVGDDARRMWVSTFHSACVRLLRYE
HEAAGLSSSFTIYDAQDSQRLIQMVLKAMDVDIKRFTPKMVAARISDAKNELIGPARYAE
TAGKDPISRIVADAYVEYDKRMRASNALDFDDLIMRTVDLLRENPLIAEHYHRRFRHILV
DEYQDTNHAQYVLVRALVGDGKDGVEPAELTVVGDSDQSIYAFRGATIRNIEEFERDFTG
ARTILLEQNYRSTQNILSAANAVIARNTGRRAKNLWTASGDGALITLDAADSEHDEARFV
VGEIDRLADSGVEWGDIAVFYRTNAQSRALEELLVRQGIPYRVVGGTRFYERREIKDALA
YLQVISNPDDTVAARRVLNVPKRGIGAKAEEAIAAHAAHYGISFGAALRHLWLRAGCPAG
EGEGIDVDALARSASPDEASADSSAPVSSDEAAGENPAARDGADESAAAGQSAAAPAASP
VESAPETAPEVLGITPRAAKSAAAFWGLIETLRAAEARGASQADILEEVLDRTGYLAELR
RSEDPQDASRVENLAELHSVAGAFAADAPGGTLADFLERVALVADSDQVPAEGERGGQVT
LMTVHTAKGLEFPVVFVTGMEDGTFPHQRSLGDESELEEERRLAYVAITRARERLYLTRA
AVRSAWGTPQEMPPSRFLDDIPAELLDVRRAATSGERMRASYGGSYGSGSYGSGSYGRSR
RSEGRDPWGDTDTGAFGSGRGGASAQPAGVRKVTRMGVTPAAKPAEDKPVLSLKVGDRIK
HATLGAGTVTGIEGEGPRTVARIRFGLGEKRLLVRMAPMEKIS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactcgacttctttgcctgaccttggtttcctgatcggccccgacggggggttc
caggacgactacgtgccgccggaggtgcccgcctttgacgtggaggacgccttgggttcc
gacgggtggccggagatcgccgtgccgggtggagcatcgggtgcgccgtcggcgtgggag
cctcccgcgtcctcgggtggtttttcgtccggctgggagcgtcccgcgcgcccgggcgtg
gaccctgagtcgctgacgcgcggcctcaacgatcgtcagcgcgaggccgtcactcacgcg
ggttcgccgctgctgatcctggctggcgcaggctccggtaagacgcgcgtgctcacgcac
cgcatcgcctacctgctggccacgggccgcgcgcgggcgggggagattctggcgattaca
ttcacgaacaaggcggcggccgagatgcgcgagcgcgcgggcgcgctcgtgggtgacgac
gcgcgtcgcatgtgggtgtcgaccttccactcggcgtgcgtgcgcctgctgcgctacgaa
cacgaggcggcgggcctgtcctcatccttcacgatctacgacgcccaggattcccagcgc
ctcatccagatggtcctcaaggccatggatgtggacatcaagcgcttcaccccaaagatg
gtggcggcgcgcatttcggacgcgaagaacgagctgatcggcccggcgcgctacgcggag
acggcgggcaaggacccgatctcgcgcatcgtcgcggacgcctacgtcgagtacgacaag
cgcatgcgcgcctcgaatgcgctggactttgacgatctcatcatgcgcacggtcgacctg
ctgcgcgagaacccgctgattgctgagcactaccaccggcgcttccgccacatcctcgtg
gacgagtaccaggacacgaaccatgcgcagtacgtcctcgtgcgtgctctcgtgggggac
ggcaaggacggcgtggagcccgccgagctgacggtcgtgggtgactccgaccagtcgatt
tacgcgttccgtggcgccacgatccgcaacatcgaggagttcgagcgcgacttcacgggc
gcgcgcacgatcctactcgagcagaactaccgctccacgcagaacatcctgtcggctgcg
aacgcggtcatcgcccgcaacacggggcgccgcgcgaagaacctgtggacggcctcgggc
gacggcgcgctcatcaccctggatgccgccgattccgagcacgacgaggcccgcttcgtc
gtcggcgagatcgaccgcctcgcggactccggcgtcgaatggggcgacatcgcggtcttc
taccgcacgaatgcgcagtcccgcgcgctggaggaactcctcgtgcgccagggcatcccg
taccgcgtcgtcggcggtacccgcttctacgagcgccgcgaaatcaaggacgccttggcg
tacctgcaggtcatctccaaccctgacgacactgtcgcggcccgccgcgtcctcaacgtc
cccaagcgcggcatcggcgcgaaggccgaagaagcgatcgccgcgcacgccgcccactac
ggcatctccttcggtgcggcgctgcgccacctgtggctgcgcgccggctgccccgcgggt
gagggcgaggggattgacgtcgacgcgctcgcgcgttccgcgtccccggacgaggcctcg
gctgattcttcggctcccgtttcctcggatgaagcggcgggggagaaccccgctgctcgc
gatggtgcggatgagagcgcggctgcggggcagagcgctgcggccccggccgcgtccccc
gtcgagagtgctcctgagacggctcccgaggtccttgggatcaccccgcgcgccgcgaag
tcggcggccgccttctgggggctcatcgagacgctgcgcgccgcggaggcgcggggtgca
tcgcaggccgacatcctcgaagaggtcctcgaccgcacaggctacctggctgaactgcgc
cgcagcgaggatccgcaggacgcctcgcgcgtggaaaacctggcggaactgcactcggtt
gcgggtgccttcgcggccgacgctccgggcgggaccctcgcggacttcctcgagcgcgtc
gccctcgtcgcggactccgaccaggttcccgcggagggtgagcgcggcgggcaggtcacc
ctcatgactgtgcacaccgcgaagggcctcgaattcccggtcgtgttcgtcaccggcatg
gaggacggcaccttcccgcaccagcgcagcctcggcgacgagagcgagctggaggaggaa
cgccgactggcgtacgtggccatcacgcgtgcgcgcgaacgcctgtacctgacgcgcgcg
gccgtgcgcagcgcctgggggactccgcaggagatgccgccctcgcggttcctcgacgac
atccccgccgagctcctcgacgtgcgccgtgcggccacgtcgggggagcgcatgcgcgcg
tcctacggcggttcctacgggtccggatcgtacggctcgggttcctacgggcgctcccgt
cgctccgagggacgcgacccgtggggcgacaccgacacgggtgccttcggctccggccgt
ggcggtgcatccgcccagcccgcgggcgtgcgcaaagtgacgcgcatgggggtgactccc
gctgctaagcccgccgaggataagccggtgctctccctcaaggtcggcgaccgcatcaag
cacgcgaccctgggcgccggcaccgtcaccggcatcgaaggcgaggggccgcgcaccgtg
gcccgcatccgcttcggcctgggcgagaagcgcctgctcgtgcgcatggctccgatggag
aagatttcgtag
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