Schaalia odontolytica: FBF35_03070
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Entry
FBF35_03070 CDS
T05977
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
soo
Schaalia odontolytica
Pathway
soo00521
Streptomycin biosynthesis
soo00523
Polyketide sugar unit biosynthesis
soo00525
Acarbose and validamycin biosynthesis
soo00541
Biosynthesis of various nucleotide sugars
soo01100
Metabolic pathways
soo01110
Biosynthesis of secondary metabolites
soo01250
Biosynthesis of nucleotide sugars
Module
soo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FBF35_03070 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FBF35_03070 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FBF35_03070 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FBF35_03070 (rfbB)
00525 Acarbose and validamycin biosynthesis
FBF35_03070 (rfbB)
Enzymes [BR:
soo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FBF35_03070 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
adh_short
NmrA
KR
Semialdhyde_dh
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QCT35090
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All DBs
Position
712667..713674
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AA seq
335 aa
AA seq
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MKIVVTGGAGFIGANFVHTLLEDHPDVDVVVLDKFTYAGNRASLTDVPAELAARLTVVEG
DIADADLVDGVVAGADAVVHFAAESHNDNSLLDPSPFIQTNLVGTFTLLEAVRRHKVRFH
HISTDEVYGDLELDDPAKFTPTTPYNPSSPYSSSKAGSDLLVRAWVRSFGVEATISNCSN
NYGPYQHIEKFIPRMITNRLRGVRPRLYGDGLNVRDWIHVRDHNTAVWDILMKGRIGETY
LIGADGETNNRDVVAILNELMGYAPDDFDHVTDRPGHDLRYAIDNSKLVNELGWEPQFTN
FRDGLADTIAWYTENEAWWAPLKEAVEAKYAAEGH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttgtgaccggcggtgccggcttcattggagcgaatttcgttcacacgctg
ctggaggaccatccggacgtcgacgttgtcgtcctggataagttcacctacgcgggtaac
cgtgcgtccctgactgacgtgcccgccgagctcgccgctcgcctgaccgttgtcgagggc
gacattgccgacgccgacctcgtggatggtgtcgtcgccggcgccgacgcggtcgtgcac
tttgccgccgagtcgcacaacgacaactccctcctcgacccctcgcccttcattcagacc
aacctggtgggcaccttcaccctgctggaggcggtgcgccgccacaaggtccgcttccac
cacatctccacggacgaggtctacggtgacctcgagctggatgatcccgcgaagttcacg
cccaccacgccctacaacccctcctcgccctactcctcgtccaaggcgggctcggacctg
ctggtgcgcgcgtgggtgcgttccttcggtgttgaggccacgatctcgaactgctcgaac
aactacggcccctaccagcacatcgagaagttcatcccccgcatgatcacgaaccgcctg
cgcggcgtgcgcccccgcctgtacggcgacggcctgaacgtgcgcgactggatccacgtg
cgcgaccacaacacggccgtgtgggacatcctcatgaagggccgcatcggcgagacctac
ctgatcggcgcggacggcgagacgaacaaccgcgacgtcgtcgccatcctcaacgagctc
atgggctacgcccccgacgacttcgatcacgtgaccgaccgcccgggccacgacctgcgc
tacgcgatcgacaactccaagctggtcaacgagctcggctgggagccccagttcacgaac
ttccgcgacggcctcgccgacacgatcgcctggtacaccgagaacgaggcgtggtgggct
cccctcaaggaagccgtcgaggcgaagtacgccgccgaaggacactga
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