Schaalia odontolytica: FBF35_03210
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Entry
FBF35_03210 CDS
T05977
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_03210
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBF35_03210
Archaeal homologous recombinant proteins
FBF35_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
CCDC39
ATG14
KASH_CCD
ABC_tran
AAA_21
RsgA_GTPase
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
QCT35115
LinkDB
All DBs
Position
complement(742283..745357)
Genome browser
AA seq
1024 aa
AA seq
DB search
MKIRWLRIVGIGPFAGEHTVDFSSFEDSGLFLLDGPTGAGKSTLIDAITFALYGDVARTK
DASKDRLRSNHITDSDPSEADLVFEVATGIYRVTRTPAYTPAGKKSQRNSKSTLTRVVED
PDAPDGWRTVEPIASGPRDVGSEIPAIVGLDKDQFLQTIVLPQGKFSQFLNATSDAREQI
LRDIFDTQIYVDFTKALVDAAASSKRGIEERRVAAISAFERVRALNDALSDDVHTAAPGA
RERSAEVEEADQLDAGAEDSSAVTRWAEDACERAREAHAQTLRVAEAATATAREASRALS
EGRALADAQAEHARVSATLAELTASEEVIASNRERADQARRALAVAPLDAAKASARARLE
AAGDQVAALSPALGDEDSIDSASLTPEAVTALGERAQDLRDEATRTRGSLEEALAVERSL
PEAHTQIDSLRSQHEQALARIASIEAEREALPLRIEQVTEALRLMRADADTLPEAASALR
TINERLDASMQADLLRSALLGASDELREATVAAKLANAAAADGHDLWIAQSASALARELE
EDTPCPVCGSTAHPNPAPAADGEITREQVAELDQARDRAEAALRDAQARHQDLVRRIAQL
NEVAGAPTPTLETERDRAAELVAKLEALSPQITEIEAALAQERARLDGLTDSLASARETA
ASLASTLQERESALAAAEARVEAERADFASLDERAAHLDERARRAAALAGACADWDNARA
ALAQAQRSLADALEEQGLEADSWRTLLLPLPQVEALEARVAAHEKALFAAHEALASERLT
RAASAPAPDLEALTEASRKAEEDAAMAARASGILEQHCAQLDAARASLEQALEALGRARE
QAGPIRRLADIAAASGPENLASTPLSAWVLIARLEEVLAAANPRLAAISSGRYELVSVPD
DGTASRKSGLGLAIVDHDTDALRSPRTLSGGETFYTSLALALGLADVVSAEAGGVELRTM
FIDEGFGSLDSHTLSLVMAQLQALRCAGRTVGVISHVEEMATQIADQIQVRPLPEGGSTL
SVRA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattcggtggctacgtattgtgggcatcggccccttcgcgggcgagcacacggtt
gacttttcctccttcgaggactcggggctgttcctgctggacggaccgacgggcgcggga
aagtccacgctcatcgacgcgatcaccttcgccctgtacggggacgtggcgcgcacgaag
gatgcgtcgaaggaccgcctgcggtccaaccacatcacggattcggatccgtcggaggcg
gacctggtgttcgaggtggcgaccggcatctaccgggtgacgcgcacccccgcatacacc
ccggcgggcaagaagtctcagcgcaattcgaagtcgacgctgacgcgggtcgtggaggat
ccggatgctccggacgggtggcgtacggtggagccgatcgcgtcgggtccgcgcgacgtg
ggctccgagattccggcaatcgtgggcctggataaggaccagttcctgcagacgatcgtg
ctcccgcagggcaagttctcccagttcctcaacgccacgtcggatgctcgcgagcagatc
ctgcgcgacattttcgacacgcagatctacgtggacttcacgaaggctctcgtcgatgcg
gccgcctcgtcaaagcgcggcatcgaagagcggcgcgtggctgccatcagcgctttcgag
cgcgttcgggcgctgaatgacgccctgagcgatgacgtgcacacggctgcacccggcgcg
cgggagcgctcagccgaggtcgaggaggccgatcagctggatgcgggcgcggaggattcc
agcgccgtgacgcgctgggccgaggacgcatgcgagcgcgcacgcgaggcacacgcgcag
accctgcgcgttgccgaggcggccacggcaaccgctcgggaggcttcccgtgccctgtcc
gaggggcgcgccctggctgacgctcaggcggagcacgcgcgcgtgagcgcgacactcgct
gagttgactgcatcggaggaagtaatcgcatccaaccgtgagcgcgcggatcaggcccgc
cgggcgctggccgtggctcccctcgacgcggccaaggcctcggcgcgcgctcgtctggag
gctgcgggagaccaggtcgcagccctgtctcccgccctcggagacgaggattccatcgat
tccgcgtccttgacacccgaggcggtgactgctctcggcgagcgggcgcaggatctgcgc
gacgaggcgacgcgcacgcgcggttctctcgaggaggccctggccgtcgaacgctcgctg
cccgaagcgcacacccagatcgactcactgcgctcccagcatgagcaggcattggcgcgc
atcgcgtcgatcgaggcagagcgcgaggcgttgcccctgcgcatcgagcaggtcaccgag
gccctgcgcctcatgcgagcggatgccgacacgctgcccgaggccgcgtccgctctgcgc
accatcaacgaacgcctggatgcctccatgcaggcggacctgctgcgctcggctctcctc
ggagcatcggatgagctgcgcgaggccactgtcgccgcgaagcttgcgaatgccgcagca
gcggacggccacgacctgtggatcgcgcagagcgcatcggccctcgcacgcgaactcgaa
gaggacacgccgtgtcccgtgtgcggctccaccgctcaccccaatccggcaccggccgca
gacggggagatcacgcgcgagcaggtcgcggagctcgaccaggcgcgagaccgtgcggag
gccgcgctgcgggatgcgcaggcccgccaccaggatctcgtgcgtcgtatcgcccagctc
aacgaggtggccggcgcccccactccgactctcgagaccgagcgggatcgagccgccgag
ctcgttgcgaagctcgaggctctcagcccgcagatcacagagatcgaggcggccctcgcg
caggagcgcgcccgcctcgacggcctcacggactccctcgcgagcgcccgagagaccgcc
gcttccctcgcgtccaccctccaggagcgtgaatccgctctggccgcggctgaggcccgc
gtggaggctgagcgcgccgacttcgcctccctcgatgagcgcgcggctcacctggatgag
cgcgcacgccgggcggcagctttggccggggcctgcgccgattgggacaatgcccgcgcc
gcgctcgcgcaggcacagcgttcccttgcggatgcgcttgaggaacagggcctcgaggcg
gactcctggcgcacgctcctgcttcctctcccccaggtcgaggctctcgaggcgcgcgtg
gccgctcacgagaaggcacttttcgcggcacacgaagcgcttgcttcggagcgcctgacc
cgcgcggcgtcggcacccgcaccggaccttgaggccctcaccgaagcctcccgcaaggcc
gaggaggacgccgctatggcggcccgagcctcgggtattctcgagcagcactgcgcgcag
ctggacgccgcccgcgcctccctcgagcaggcgttggaggcgctcggccgcgcccgggag
caggccggtcccatccgccgcctggctgacattgccgccgcgtccggccctgagaacctg
gcctctactcccctatcggcctgggtgctcatcgcgcgcctggaagaggtgttggcggcc
gcgaacccacgcctggcggcaatctcgtcgggacgctacgaactcgtgtctgtccccgac
gacggcaccgcctcgcgcaagtccggcctgggcctcgcgatcgtcgatcacgacacggac
gcgctgcgcagcccgcgcacgctgtcgggcggggaaacgttctacacgtccctcgcgctg
gcgctcggcctcgcggacgtcgtctctgccgaggccggtggcgtcgagctgcgcacgatg
ttcatcgatgagggcttcggatcgctcgactcgcacacgctgagcctggtgatggcgcag
ctccaggcgctgcgctgcgcgggacgcacggtcggcgtcatctcgcacgtcgaggagatg
gcgacccagatcgcggatcagatccaggtgcggcctctgccggagggcggatcgaccctc
agcgtgcgcgcgtag
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