Schaalia odontolytica: FBF35_03215
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Entry
FBF35_03215 CDS
T05977
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_03215 (sbcD)
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FBF35_03215 (sbcD)
Archaeal homologous recombinant proteins
FBF35_03215 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Fibrillarin_2
Motif
Other DBs
NCBI-ProteinID:
QCT36436
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Position
complement(745354..746556)
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AA seq
400 aa
AA seq
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MILHTSDWHLGRTLHGASLGDSADAFIEWLVALVRERGVDAVLISGDVFDRAVPPVDALA
RMRRALRELTEITTVILTSGNHDGAARLGLFADMLTPSLHVVTDPEAIGTPVEAGGALVY
PMPYLEPDLVRQSLSDLPVRGEDDLPAPLPRSHQAVLAAALRRVRADISARRDAGDERPA
IAMPHAFVTGAQTSDSERDIQVGGVPSVSADLFDTLGGEEPLAHGLDYVAAGHLHRPQDI
SGASVPIRYAGSPIAYSFSEAGATKSITLVTTDATSVTDIEVVPIPTLRGIAVLEGTMDE
LLTDPDEATTASYVSITVTDDARPERMVPRIREVYPHALVVVHRPSQAPSLAPAMTVRAS
RDPREVTEEFYEAVGGRALSAQERELALDVWAQLRGKDMQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ttgattctgcacacctccgactggcacctggggcgcacgctgcacggcgcgtccctgggc
gacagcgcggatgcgttcatcgagtggttggtggccctggtgcgtgagcgcggcgtggat
gccgtgctcatctcgggcgacgtgttcgaccgcgcggttccgcccgtggatgcgctcgcg
cggatgcgccgcgccctgcgcgaactgacggagatcacgacagtcatcctgacgtcggga
aaccacgatggggccgcgcgcctggggctgttcgccgacatgctcaccccctcgctgcac
gtggtgacggacccggaggcgatcggcacgcccgtcgaggccgggggcgccctcgtgtac
ccgatgccctacctcgagcccgacctcgtgcgccagagcctgtcggacctgcctgtgcgg
ggcgaggacgacctgcccgctcctttgccccgctcccaccaggcggtcctggcggctgcc
ctgcgccgggtgcgcgcggacatttcggctcggcgcgacgcgggcgacgagcgcccggcc
atcgcgatgccgcacgccttcgtgacgggggcacagacctcggactccgagcgcgacatc
caggtgggcggcgtcccctccgtatcggcggacctgttcgacaccctcgggggtgaggag
cccctggcccacggcctggactacgtggcagccgggcacctgcaccgcccgcaggacatc
tcgggcgcatccgtcccgatccgctacgcaggctcccccatcgcgtattccttctccgag
gccggggccaccaagtcgatcaccctcgtgaccacggacgccacctcggtgaccgacatc
gaggtggtgcccatcccgacgctgcggggcatcgcggtgctcgagggaaccatggatgag
ctgctcacggatcccgacgaggccaccacggcctcgtacgtgtcgatcacagtcacagac
gacgcgcgccccgagcgcatggtgccgcgcatccgagaggtctacccgcacgccctggtc
gtcgtgcaccgtccctcccaggcaccctcgctggctcccgcgatgaccgtgcgcgcgtcc
cgcgatccacgcgaggtcacggaggagttttacgaggccgtgggcgggcgggcgctaagc
gctcaggagcgcgagctggccctggacgtgtgggcgcagcttcgaggaaaggacatgcag
tga
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