Schaalia odontolytica: FBF35_04575
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Entry
FBF35_04575 CDS
T05977
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
soo
Schaalia odontolytica
Pathway
soo03030
DNA replication
soo03430
Mismatch repair
soo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FBF35_04575
03430 Mismatch repair
FBF35_04575
03440 Homologous recombination
FBF35_04575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soo03032
]
FBF35_04575
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_04575
Enzymes [BR:
soo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FBF35_04575
DNA replication proteins [BR:
soo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FBF35_04575
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FBF35_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
DUF7508
UVR
Motif
Other DBs
NCBI-ProteinID:
QCT35354
LinkDB
All DBs
Position
complement(1045435..1047090)
Genome browser
AA seq
551 aa
AA seq
DB search
MVSAALSRASSVELQPSLDAVGTPASGGHWIVVDLETTGLGAGAEITEIGAVRIRDGAVV
DEFSSLVKPSRPIPPFITSLTGITPAMVAEADPIASILERFMEWSGLGASDSPVLVAHNA
SFDVGFLRRAARACARPWPRVRVVDTLALARLALPRPLVRNHKLGTVASYFGTATVPEHR
ALGDARATAEILLGFIDLLAAAGATDVEDLIVLTDQAPARRPSTPDFVADLPTSPGVYHF
IDTAGDTLYVGSASSLRSRVGSYYTKGEKRPKVQRMVSLAAGVRPYPTASILEARIRELR
DIKALAPPYNSASRRQGSQHWVIAEAGRARVVSSVTLGDLPRALGPFGTRAHAQRAAGAI
ERVLAQADHDSSGAILDEAVEASSLAVPNALTSLMERLSAQGLFEAAAGARDELSAYIAG
VERATMRPILAAPRIVWGARRDGGEPGWILHVASYGRHLSSVVVPPRSAPSPWIDLLTST
EPIETGGMAASVASWAETSLLCAELCREGTRLVEWNGPLPWAQHVDSPLRDGRLRELLAH
ATAQQRLSPRT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtggtatctgcggccctttcgagggcctcgtcggtggagcttcaacccagcctcgacgcc
gtcgggacgccggcctcaggcgggcactggatcgtcgtcgacctcgagacgacgggcctg
ggtgcgggcgcggaaattactgagatcggcgctgtgcgcatccgcgacggagcggtcgtg
gacgagttttcttccctcgtgaaaccctcgcgtcctatcccgcccttcatcacgtcgctg
acgggcatcacaccagcgatggtggcggaggcggacccgatcgcatccattctggaacgc
ttcatggagtggtcaggccttggagcttcggattcccccgtcctcgtcgcacataacgcg
tcttttgacgtgggtttcctacgccgtgcggcccgcgcgtgtgctcgcccgtggcctcgt
gtgcgcgtcgtcgatacgctcgcactcgcgcggctcgccctgccacgcccgctcgtgcgt
aaccacaagctcggcacagtcgcctcctacttcggtaccgccaccgttcccgagcaccga
gcacttggagacgcgcgagcgacggcagagatcctcctggggttcatcgacctgctcgcc
gctgccggcgcgactgacgtcgaggacctgatcgtgctgacggatcaggctccggcgcgg
cgcccatcaacgcccgacttcgtcgcggacctgccgacctctcccggggtctatcacttc
atcgacaccgcgggagacactctctacgtggggtcggcctcgtcgctgcgctcgcgcgtg
ggcagttactacacgaagggcgagaagcgcccgaaggtgcagcgcatggtgtccctggcc
gcgggcgtgcgcccctatccgaccgcctcgattctcgaggcgaggatccgagaactgcgc
gacatcaaggccctcgccccgccctacaactccgcgtcgagacggcagggatcccagcac
tgggtcatcgccgaggccggccgcgcccgcgtcgtttcgtccgtgacgctgggcgacctg
ccccgcgccctcggtccgttcgggacgcgcgcgcacgctcagcgggctgcaggagcgatc
gagcgggtcctcgcccaggccgatcacgactcctcgggcgccatcctcgacgaggccgtg
gaagcctcgtcattagcggtcccgaacgcgctcacttccctgatggaacgcctgtccgcg
caggggctgttcgaggccgcggctggagcgcgcgacgagctgagcgcctacatcgctggc
gttgagcgcgcaaccatgcgccccatcctggcggccccgcgtatcgtctggggcgcgcgt
cgcgacggtggagaacccggctggattctgcatgttgcctcctacggacgccacctcagt
tcggtcgtcgtgcccccgcgctccgccccgtcgccgtggatcgatcttctcacctccacg
gagccgatcgagaccggcgggatggccgcatccgtcgcctcgtgggctgagacgtcactc
ctgtgcgccgagctgtgccgcgaagggacgcgcctcgtcgaatggaacggtcccctcccc
tgggcgcagcacgttgacagcccgctacgcgacgggcggttgcgcgagctattagcccac
gcaaccgcccagcagcgtctgtccccgcgcacctga
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