Schaalia odontolytica: FBF35_05460
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Entry
FBF35_05460 CDS
T05977
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
soo03036
]
FBF35_05460
Chromosome and associated proteins [BR:
soo03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FBF35_05460
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
GSH_synth_ATP
Motif
Other DBs
NCBI-ProteinID:
QCT35509
LinkDB
All DBs
Position
complement(1233126..1234073)
Genome browser
AA seq
315 aa
AA seq
DB search
MTSLEALVRDWVDYLRVEKGASAHTVSNYRRDVARYAFDMKRQGKLNVEDISPRDIEDYT
MRLASGQVTGTPAAASSVARASAAIRGLHKYALTEGAVGNDAAAQLHAPRQGRHLPKALS
VDEVGRLLDAAHADDSPIGLRDAALLELLYATGARVSEAVSLSADDLDLDGDVPVVRLFG
KGRKERIVPVGSFAVDALDAYRVRARPALAARGRGSTAFFLNSRGGALSRQSAWTAIRRA
AEAAQLGERVSPHTLRHSFATHLLEGGASVREVQELLGHASVVTTQIYTQVTAAALREVF
TLSHPRARGTDASAR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacatccctcgaagctctcgttcgcgactgggtggactatctgcgcgtcgagaagggg
gcgtctgcgcatacagtttcaaactatcgacgcgacgtcgcccgctacgcgtttgacatg
aagcgccaagggaagctcaacgtcgaagacatcagtcccagggacatcgaggactacacg
atgcgcctggcatctgggcaggtcacaggaactccggcggcagcatcgtcggtggcgcgc
gcgtccgcggcgatccgcgggctccacaagtacgcgctgaccgagggggcggtcggaaac
gatgcagctgcgcagctacatgccccgcgtcaggggcggcacctccccaaggccctgtcc
gtcgacgaggtgggacgactgctggacgccgcccacgccgacgactctccgatcggcctg
cgcgatgccgccctccttgagctcctgtacgcgacgggggcccgggtctccgaggccgtc
tcgctcagcgctgatgacctcgacctggacggagacgttcctgtcgtgcgcctgttcgga
aaagggcgcaaagagcggattgttcccgtggggtcgttcgccgtggacgccctcgacgcg
taccgggtgcgcgcccgcccagcgctcgccgcacgaggccggggatccaccgcgtttttc
ctgaactcccggggaggcgcgctgtcccggcagagtgcgtggaccgcgatccggcgcgcg
gcggaggccgcgcagctgggggagcgggtgtctccgcatacgctgcggcactcttttgcg
acgcatctgcttgagggtggtgcatccgtgcgcgaggtgcaggagcttctcgggcacgcg
tcggtggtgacgactcagatctacacgcaagtgactgccgccgcgctgcgcgaagtcttt
acgctctcgcaccctcgggcgcgtggcaccgacgcatccgcgcggtga
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