Schaalia odontolytica: FBF35_06090
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Entry
FBF35_06090 CDS
T05977
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soo03032
]
FBF35_06090
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_06090
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FBF35_06090
DNA replication proteins [BR:
soo03032
]
Prokaryotic type
DNA Topoisomerases
FBF35_06090
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FBF35_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Inp1
Motif
Other DBs
NCBI-ProteinID:
QCT35617
LinkDB
All DBs
Position
1377626..1380094
Genome browser
AA seq
822 aa
AA seq
DB search
MAKKDQVVDIPEKDENITEIDVSDEMRGSFLEYAVSVIYARALPDARDGLKPVQRRILFQ
MDQMGLRPDKGHVKSQRVVGEVMGKLHPHGDSAIYEALVRLAQPFNLRVPLVDGHGNFGS
LDDGPAAARYTEARMAPAALDLVTGLDEDTVDFVPNYDNQFMQPDVLPAAFPQLLVNGAS
GIAVGMATNIAPHNLSETIAGAIHLLDNPSASVADLMRYIPGPDLPEGGVIVGLEGIKEA
YEAGRGAFKTRAKVQIERVTARKMGIIVTQLPYMVGPEKVIEKIKENANAGRLKGISSVQ
NLTDRIHGLRLVIEVKNGFNPEAVLQQLYQRTPLEDSFSINAVALVGGQPRTLGLKEMLQ
VFLDHRLDVTTRRSRFRLKKCEDRLHLVEGLLIAILDIDDVIAIIRSSDDAEIARERLMT
AFDLSEAQANYILELRLRRLTKFSRIELETERDELLAKIASLREILEDPELLRALVKKEL
REVSDRLGTPRRTLLLASTGTPVGAASDDAALAALPSVSRSGKGLDLQIPDDPCVVVLSS
SGALARVEGGDPLEPGPRAASDGWRVQLPSTARSQVAVVTEDGVAHRIDVVDLPALPRFE
TGLSLAGAMPASLLLHTDVPAVGLLDPEGTDVVAMGTARGTVKRLRPDVLQRDEWEVIAL
EDGDRLVGFDRCSDEADLVFISSDAQLLRTPAAKVRPQGRTAGGMAGMKLNPGAEALGFW
VVEAPIDAVVVTVAAALGALPGTGQTTVKVTPFECYPTKGRGGQGVRCQRFLRGEDRLDI
AWVGTKPARAASADGSPVELPAEDERRDGSGVPITFAIASIG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaggaccaggtcgtcgacatccctgagaaggacgagaacatcacagagatc
gacgtgtccgatgagatgcgtgggtccttcctggagtatgccgtctcggtgatctacgct
cgcgcgctccccgacgcgcgcgacggcctcaagcccgtgcagcgccgcatcctgttccag
atggatcagatggggctgcgccccgacaagggacacgtgaagtcccagcgcgtcgtcggc
gaggtcatgggtaagctccacccgcacggcgattccgcgatttacgaggccctggtgcgc
ctcgcgcagcccttcaacctgcgcgttcccctggttgacggccacggtaacttcggatct
ctggacgacggccctgccgccgctcgttacaccgaggcgcgcatggcacccgccgctctg
gacctggtgacgggtctggatgaggacacggtcgatttcgtccccaactacgacaaccag
ttcatgcagccggacgtcttgccggcggccttcccccagctcctggtcaacggcgcctcg
ggcatcgccgtgggtatggcgacgaatatcgccccgcataacctgtcggagacgatcgct
ggcgctatccacctgctggataacccgtcggcgtccgtcgccgacctcatgcgctacatc
cccggccccgacctgcccgagggcggcgtcatcgtcggcctcgagggcatcaaagaagcc
tacgaagccggccgaggcgcgttcaagacccgcgcgaaggtccagatcgagcgcgtgacc
gcccgcaagatgggcatcatcgtcacgcagctgccctacatggtcggcccggaaaaggtc
atcgaaaagatcaaggagaacgcgaacgcgggacgccttaagggcatttcctcggttcag
aacctcaccgaccgtatccacggcctgcgcctggtcatcgaagtaaagaacggcttcaac
cccgaggccgtgctccagcagctctaccagcgcacgcctctggaggattccttctcgatc
aacgcggtggcgctcgtgggcggccagccgcgcacgctgggcctgaaggagatgctgcag
gtcttcctggatcaccgcctggatgtcacgacacgccgcagccgcttccgcctgaagaag
tgcgaggatcgcctgcacctggtcgagggcctgctcatcgcgatcctggacatcgacgac
gttatcgccatcattcgctcctccgatgacgcggagatcgcgcgcgagcgcctcatgacg
gccttcgacctgtccgaggcccaggccaactacatcctcgagctgcgcctgcgtcgcctc
acgaagttctcgcgcatcgagctggagaccgagcgcgatgagctgctggcaaagatcgct
tcgctgcgcgagatcctggaggatccagagctgctgcgcgcgctcgtgaagaaggagctg
cgcgaggtctcggatcgcctgggcacgccgcgtcgcacgctgctgctggcctcgacgggc
acgcccgtgggagccgcgtccgacgatgccgcactggcggccctgccgtcggtgtcgcgg
tccggtaagggccttgacctgcagatcccggacgacccgtgcgtcgtggtcctgtcctcc
tcgggcgctctcgcccgcgtcgagggcggggacccgctggagcccggtccgcgcgcggcg
tcggacggctggcgcgtacagctgccgtcgacggcccgctcgcaggtggccgtggtgacg
gaggacggcgtcgcccaccgcatcgacgtcgtggatctaccggcgctcccccgctttgag
acgggcctgtcgctcgccggcgccatgcctgcgtcgctcctcctgcacacggacgttccc
gcagtgggcctgctcgatcccgaaggcaccgacgtggtcgcgatgggcacggctcgcggc
acggtcaagcgcctgcgcccggacgtgctgcagcgcgacgagtgggaggtcatcgccctg
gaggacggcgatcgcctggtgggcttcgatcgctgctcggacgaggcggacctggtgttt
atttcgtcggacgcgcagctgctgcgtacccccgccgcgaaggtgcgcccgcagggtcgc
acggccggcggcatggccggcatgaagctgaaccctggggccgaggccctgggcttctgg
gtggtcgaagctcccatcgacgccgtcgtggtgacggtggccgcggcgctcggcgcgctg
ccgggcacgggccagacgactgtgaaggtgacgcctttcgagtgctaccccacgaagggt
cgaggcggccagggcgtgcgctgccagcgcttcctgcgcggcgaggatcgcctggatatc
gcttgggtgggcaccaagccggcacgggccgcgtccgcggatggttcgcctgtggagctt
cccgctgaggatgagcgccgcgacggctcgggtgtaccgatcacctttgcgatcgcatcg
atcggctga
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