Schaalia odontolytica: FBF35_06115
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Entry
FBF35_06115 CDS
T05977
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soo03032
]
FBF35_06115
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_06115
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FBF35_06115
DNA replication proteins [BR:
soo03032
]
Prokaryotic type
DNA Topoisomerases
FBF35_06115
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FBF35_06115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QCT35620
LinkDB
All DBs
Position
complement(1385027..1387147)
Genome browser
AA seq
706 aa
AA seq
DB search
MMHIVTPTDASDYNARHLSVLEGLEAVRKRPGMYIGSTDHRGLMHCLWEIIDNAVDEALE
GHCDTIDVRLHPDHSASVADNGRGIPVDIVPGQGLTGVEVVYTKLHAGGKFGGGSYAASG
GLHGVGASVVNALSARLDVQVDRGGKTHEMCFRRGEPGEFDDSKQRTPNSPFKPFVDGST
LKTVGKVKKSQTGTRVRFWADFQIFPSTEGFSWENLLARARQTAFLVPGLTINCYDERGE
EELHESFRFDGGVVDFANWLASDGPVTDTWHITGAGTYNETVQALDSETGHLRATEVERT
CEVDIALRWGIGYDTTVQSFVNIIATPKGGTHVTGFEQAVLKTLRAAIDKNARKLKVGAK
DGRPEKDDVQAGMTAVITVRFPEPQFEGQTKETLGTPQIRTVVNRVVSDWLKAKFASSKR
DDKQQTSLLMEKVVGEMKARVSARLHKEISRKKNALETSSLPAKLADCRLEDVEETELFI
VEGDSALGTAKAARNSHYQALFPIRGKILNVQKASTADMLANAECANIIQVIGAGSGRTF
DLSQARYGKVILMTDADVDGAHIRTLLLTLFFRYMRPMVEAGRIYAAVPPLHRIEVAGKG
RKKREYIYTYSEDELHRKLAALRRSGRTWKEPIQRYKGLGEMDADQLAETTMDRAHRSLR
RITLADEEALRQAEDVFELLMGSTVGPRKEFIVEESAGLDRTRIDA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacatcgtgactcctaccgacgcatccgactacaacgcacggcacctctcggtc
ctcgaggggctcgaagccgtgcgcaagcgccccggcatgtacatcggctccaccgaccat
cggggcctcatgcactgcctctgggagatcatcgacaacgcggtcgacgaggccctggaa
ggccactgcgacacgatcgacgtgcgcctgcaccccgatcactccgcctccgtcgccgac
aacggccgaggaatccccgtcgacatcgtgcccggacagggcctgacgggcgtcgaggtc
gtctacactaagctccacgccggcggtaagttcggcggcggctcctacgcggcctcgggc
ggcctccacggcgtcggcgcctccgtcgtgaacgccctgtcggcccgcctcgacgtgcag
gtcgaccgcggcggcaagacccacgagatgtgcttccgccgcggcgaacccggcgaattc
gacgactccaagcagcgcacccccaactcgccgttcaagccgttcgtggatggctcgacg
ctcaagaccgtcggcaaggtgaagaaatcccagaccggcacgcgcgtgcgcttctgggcg
gacttccagatcttcccgtcgaccgaggggttctcgtgggagaacctgctggcgcgcgcc
cgccagaccgcgttcctcgtgcccggcctgaccatcaactgctacgacgagcgcggcgaa
gaggaacttcacgagagcttccgcttcgacggcggcgtcgtcgacttcgcgaactggctg
gcctccgacggccccgtcaccgacacgtggcacatcacgggtgcgggtacctacaacgag
accgtgcaggctctggactccgagaccgggcacctgcgcgccaccgaggtcgagcgcacc
tgcgaggtcgacatcgcgctgcgctggggcatcggctacgacacgaccgtccagtccttc
gtcaacatcatcgccacccccaagggcggcacccacgtcaccggcttcgagcaggcagtc
ctcaagaccctgcgtgccgcgatcgacaagaatgcgcgcaagctcaaggtcggcgcgaag
gacgggcgccccgaaaaagacgacgtccaggccggcatgacggccgtcatcaccgtgcgc
ttccccgagcctcagttcgagggacagaccaaggaaacgctgggcactccccagattcgc
accgtcgtcaaccgtgtggtctccgactggctgaaggccaagttcgcctcctccaagcgc
gacgacaagcagcagacctccctcctcatggagaaggtcgtcggcgagatgaaggcccgc
gtctccgcgcgcctgcacaaggagatctcgcgtaagaagaacgcgctggaaacctcctcg
ctgcccgccaagctcgcggactgccgcctcgaggacgtcgaggagaccgagctcttcatc
gtcgagggcgactccgccctgggcacggccaaggccgcgcgcaactcccactaccaggcc
ctgttcccgattcgaggaaagatcctcaacgtgcagaaggcctcgaccgcggacatgctg
gccaacgccgagtgtgccaacatcatccaggtgatcggcgcgggctcgggccgtaccttc
gacctgtcccaggctcgctacggcaaggtcatcctcatgaccgacgccgacgtcgacggc
gcgcacatccgtaccctgctgctcaccctgttcttccgctatatgcgccccatggtcgag
gctggccgcatctacgccgccgtcccgcccctgcatcgcatcgaggttgcaggcaaggga
cgcaagaagcgcgagtacatctacacctactccgaggacgagctgcatcgtaagctcgcc
gccctgcgtcgctcgggccgcacgtggaaggaacccatccagcggtacaagggcctgggc
gagatggatgccgaccagctggctgagaccacgatggaccgggctcaccgctcgctgcgt
cgcatcacgctggccgacgaggaagccctgcgtcaggcggaggacgtgtttgagctgctc
atgggctcgaccgtgggcccgcgcaaggagtttatcgtcgaggaatccgcggggctggat
cgtacgcgtatcgacgcgtaa
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