Schaalia odontolytica: FBF35_06550
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Entry
FBF35_06550 CDS
T05977
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
soo
Schaalia odontolytica
Pathway
soo00470
D-Amino acid metabolism
soo00550
Peptidoglycan biosynthesis
soo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FBF35_06550 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FBF35_06550 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
soo01011
]
FBF35_06550 (murD)
Enzymes [BR:
soo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
FBF35_06550 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
soo01011
]
Precursor biosynthesis
Amino acid ligase
FBF35_06550 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QCT35697
LinkDB
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Position
complement(1488275..1489720)
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AA seq
481 aa
AA seq
DB search
MSRFAAVVGWGKSGQGAAGALLARDWQVRAFDARGGQSLFFDDVAGVDVHVDDDPEALAR
AIVEASPDLVVVSPGIPAHHPVFSACEAAGIEVWGEVELAWRLQEEGPHAGRPWLVVTGT
NGKTTTVGMLGEILRCAGAKAEEVGNIGTPITRAIDSDAEVFAVELSSFQLHTARTVSPL
ASICLNVDADHLDWHGSVEAYAADKARVYENTIRACVYPASDRRVEQMVENADVVEGARA
IGLTLGSPSVSQFGIVEGLLVDRAFVEDRARHAAALAHISDLAGAYGPHPSAAVVSDALA
AAALARAYGVEPEAVEAGLRAFRPAGHRRAIIAQAADLTWVDDSKATNAHAARASLAGLP
PRSAIWIVGGDAKGQDFTELIRQVEPTLRGVVVIGEDRAPLVEALQAGAPDVPRVEVDGH
EDWMFSVVNEAVALSMPGDTVVLAPACASWDQFDNYGQRGDAFADAVSRLAAQWGSAGGD
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttcgctgctgtcgtcggctggggcaagtccgggcagggcgctgctggcgcg
ctgctcgcgcgcgactggcaggtgcgtgccttcgacgcgcgcgggggacagtccctgttc
ttcgatgacgtcgccggtgtcgatgttcacgtcgacgatgatcctgaggctcttgcacgc
gcgatcgtcgaggccagccccgacctcgtcgtcgtgtctcctggcattcccgcacaccac
ccggtcttctcggcctgcgaggccgccggcatcgaggtgtggggcgaggttgaactcgct
tggcgtctgcaggaggaaggcccgcacgcgggtcgcccgtggctggtcgtgaccggcacg
aacggtaagacgacgacggtcggcatgctcggtgagatcctgcgctgcgcgggtgccaag
gccgaggaggtcggcaatatcggaacgccgattacgcgggcgattgactccgacgccgag
gtcttcgcggtggagctgtccagcttccagctgcacacggcacggaccgtctcgcccctg
gcgtcgatctgcctgaacgtggatgccgatcacctggactggcacggcagcgtggaggcg
tacgcggccgataaggcgcgcgtctacgagaacacgatccgcgcatgtgtctaccccgcg
tccgatcgacgcgtggagcagatggtggagaacgccgacgtcgtggagggggctcgcgcg
atcgggctgaccctcggctcgccgagcgtctctcagttcggcatcgtcgagggcctgctg
gttgatcgtgcattcgtggaggaccgcgcgcgtcacgctgccgccctcgcgcacatttct
gacttggcgggggcgtacggcccccacccgtccgccgcggttgtgtcggacgccctggct
gccgcggcccttgcccgcgcctacggcgttgagcccgaggccgtcgaggcggggctgcgc
gcgttccggccggctggacaccgccgcgcaatcatcgcccaggctgcggacctgacctgg
gtggacgattcgaaggcgacgaatgcgcacgcggcgcgcgcctctctcgcgggactgccg
ccgcgcagcgcgatctggatcgtcggtggcgacgcgaagggacaggacttcacggaactg
atccgtcaggtcgagccgacgctgcgcggtgtcgtcgtcatcggcgaggaccgtgcgccc
ctcgtggaagcgctgcaggccggcgcgccggacgtcccccgcgtcgaggtcgacggccac
gaggactggatgttctcggtcgtcaacgaggccgtggcactgtccatgccgggcgacacc
gtcgtgctcgccccggcctgcgcctcgtgggatcagttcgataactacggccagcgcggc
gacgcgtttgccgatgccgtgtcgcgcctggcggcccagtgggggagcgccggtggcgac
gaataa
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