Schaalia odontolytica: FBF35_06665
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Entry
FBF35_06665 CDS
T05977
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
soo
Schaalia odontolytica
Pathway
soo00300
Lysine biosynthesis
soo00470
D-Amino acid metabolism
soo01100
Metabolic pathways
soo01110
Biosynthesis of secondary metabolites
soo01120
Microbial metabolism in diverse environments
soo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FBF35_06665 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FBF35_06665 (dapF)
Enzymes [BR:
soo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FBF35_06665 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QCT35718
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Position
complement(1513624..1514547)
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AA seq
307 aa
AA seq
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MMNTQLPAHARVVKAHGAGNSFVVATDQYDDYDPSEAEVATLCSPAFGIGADGFIRAVER
DGLWFMDYRNADGSKAEMCGNGVRVFVDHLRREGLVDLPVGQTLDVATRGGIKRVTPESE
DEGQGASYRVDMGPAASPARETITVTVPGIDGVLGGIWVDMPNPHTVVELADEETLREVF
LPTVDVSQIPQAQRPSYEPAPQAGTNLELVVDLTEPGGERGHIAMRVLERGVGETQACGT
GCCAAALATALRRGPGTPTQWVVDIPGGTVIVGLDGVIDWSGESPRITDASVFLTGPATR
VAEIRLP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacacgcagctgcccgcccacgcccgcgtcgtcaaggcccacggtgccggtaat
tccttcgttgtcgccacggaccaatacgacgactacgaccccagcgaggctgaggtcgcg
acgctgtgctcgcctgccttcgggatcggcgcggatggcttcatccgggccgtcgaacgc
gacggcctgtggttcatggactaccgcaacgcagacggctcgaaggctgagatgtgcggt
aatggcgtgcgcgtcttcgtcgatcacctgcgccgcgagggcctcgtggatctgccggtt
gggcagacgctggatgtggccacgcgcggcggcatcaagcgcgtgacccccgaatccgag
gacgaggggcagggagcgagctaccgcgtcgacatggggccggcggcctctccggcgcgc
gagacgatcacggtgaccgttccgggaatcgacggcgtgctcggcggtatctgggtggat
atgcccaacccgcacacggtcgtcgagcttgccgacgaggagaccctgcgcgaggttttc
ctgcccaccgttgacgtgtcccagatcccgcaggcacagcgcccctcttacgagccggcg
ccccaggcggggacgaacctcgagctggtcgtcgacctgaccgagccgggcggggagcgt
gggcacatcgcgatgcgcgtgctggaacgaggcgtgggggagacccaggcgtgcggcacc
ggatgctgcgcggcggccctcgccacggctctgcgtcgcggtcccggtacgcccacccag
tgggtcgtcgacattccgggcggaacggtcatcgtcggcctcgacggcgtcatcgattgg
tcgggggagagcccccggatcacggacgcctcggtgttcctcaccggtcccgcgacccga
gtcgccgagatccgcctgccctga
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