Schaalia odontolytica: FBF35_07055
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Entry
FBF35_07055 CDS
T05977
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
soo
Schaalia odontolytica
Pathway
soo03420
Nucleotide excision repair
soo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FBF35_07055
03430 Mismatch repair
FBF35_07055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_07055
Enzymes [BR:
soo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FBF35_07055
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FBF35_07055
MMR (mismatch excision repair)
Other MMR factors
FBF35_07055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QCT35785
LinkDB
All DBs
Position
complement(1605849..1607864)
Genome browser
AA seq
671 aa
AA seq
DB search
MNPEELLEALDPDQRAVATQVAGPLAVLAGAGTGKTRAITYRIAYGAAVGAFDPSNVLAV
TFTQRAAFEMRHRLAQLGVPKAQARTFHSAALRQLRHFWPTVVGGPLPDVIPHKASLVAA
SAARLGITIDRTSVRDIAAEVEWAKVSMIDAAHYASRVARLRRDVPAGLDAGDMARLLDV
YEDAKNERGVIDFEDILIYLCGMLQERTDVASIVRKQYRSFVVDEFQDVNLLQARLLDLW
LGGRHDVCVVGDVAQTIYSFTGASPDYLTGFGRKHPGARIVELTRDYRSTPQIVSLANDV
LARSTQREGTVRLSSQRDGGAQVTYRTYDDDRAEAEGVAASIADLIAGGMAPHSIAVLMR
TNGQSQAFEEALGARGIPVAVAGGKPFFARDDVRTAISRLRAAAAAATDDGSVGEIVRDV
LSGVGWAPEAPSGQAGSERWSNMNAIVGWADDSEAETLAAFVAELDERVAYQVEPDKAGV
ELATIHAAKGLEWDAVFLVGVAEGLLPISYAKTAAAREEERRLLYVAVTRARDLLTLSWA
RSRGADGRGKRKRSRLLDGIWPEEVGVGAPKKKARASTRALNQAFEEEASPQAIELFGRL
KAWRLEVSRQAGVPPFAVFTDQTLRDIAQAMPKNTTQLRVIRGIGDVKVQRFAAPVLALV
RGEEVIVDEGA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggaactgctggaggccctggaccccgatcagcgcgccgtcgccacgcag
gtcgctggcccgctcgccgtcctggcgggtgcgggcaccggcaagacccgcgcgatcacg
taccgcatcgcgtacggggcggccgttggcgccttcgacccgtccaacgtgctcgccgtg
accttcacgcagcgcgcagccttcgaaatgcgccaccgcctggcccagctgggtgttcca
aaggctcaggcgcgcaccttccactccgccgcgctgcgccagctgcgccatttttggccc
accgtcgtgggtggcccgctgccggacgtcatcccgcacaaggcctccctcgtcgcggct
tccgctgcgcgcctggggatcacgatcgaccgcacgagcgtgcgcgatatcgcggccgag
gtcgaatgggcgaaggtctcgatgatcgacgccgcccactacgcttcgcgcgtggctcgc
ctgcgccgcgacgtgcccgccgggctggatgcgggcgacatggcgcgcctcctcgacgtg
tacgaggacgcgaagaacgaacgcggcgtcatcgactttgaggacatcctcatctacctg
tgcggcatgctgcaggaacgcaccgacgtcgcctcgatcgtgcgcaagcagtaccgctcc
ttcgtggtcgatgagttccaggacgtcaaccttctgcaggctcgcctgctcgacctgtgg
ctgggtgggcgccacgacgtgtgcgtcgtcggcgacgtcgcgcagaccatctactccttt
acgggcgcgtccccggactacctgaccggtttcggacgcaagcatccgggcgcacgcatc
gtcgagctgacccgcgactatcgttcgaccccgcagatcgtgagcttggcgaacgacgtc
ttggcccgctcgacccagcgtgagggcacggtgcgcctgtccagccagcgcgacggcggc
gcccaggtcacctaccgcacctacgacgacgatcgagccgaggccgagggcgtcgcagcc
tcgatcgcagacctcatcgcgggcgggatggcaccccattcgatcgcagtcctcatgcgc
accaacggccagtcacaggccttcgaagaggccctgggagcgcgcggtattcccgtcgcc
gtcgccgggggaaagcccttctttgcgcgtgacgacgtgcgtaccgccatctcgcgcctg
cgggccgcggcggcggccgccaccgacgacgggagcgtgggcgagatcgtgcgcgacgtc
ctctcgggcgtcggctgggcacccgaggcaccctccggccaggcgggatcagagcgctgg
tccaacatgaacgcgatcgtcggctgggcggacgacagcgaggcggagacgctcgccgcc
tttgtggcggagctcgacgaacgcgtcgcctaccaggtcgaaccggacaaggctggtgtc
gagctggccacgatccacgcggcgaagggcctcgaatgggacgccgtcttcctcgtcggc
gtcgccgaaggcctcctgccgatctcgtacgcaaagaccgccgccgcacgcgaggaagag
cgtcgcctgctgtacgtggccgtcacccgtgcccgcgacctgctgaccctgtcgtgggcg
cgctcgcggggcgcggatgggcgcggcaaacgcaagcgcagtcgcctgctcgacggtatc
tggcccgaggaagtgggcgtgggcgcgccgaagaagaaggcgcgtgcctccacgcgcgcc
ctcaaccaggccttcgaggaggaggcctcaccccaggcgatcgagctcttcgggcgcctc
aaggcgtggcgtctcgaggtctcgcgccaggcgggcgtgccgcctttcgccgtgtttacc
gatcagaccctgcgtgatatcgcccaggccatgccaaagaacacgacgcagctgcgcgtt
atccgtggcatcggtgacgtgaaggtgcaacgctttgccgccccggtgctcgcattggta
cgcggcgaagaggtcatcgtcgacgaaggggcctga
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