Schaalia odontolytica: FBF35_07145
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Entry
FBF35_07145 CDS
T05977
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
soo
Schaalia odontolytica
Pathway
soo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FBF35_07145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soo02000
]
FBF35_07145
Transporters [BR:
soo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FBF35_07145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QCT35802
LinkDB
All DBs
Position
1624349..1626166
Genome browser
AA seq
605 aa
AA seq
DB search
MNLRKKRWMVTGAALAMVASLGLSACGGGSSSSSGGGQAANSETGKNEVTMASRTPNWIF
PVSAKGYTQGENGQFIQAMYRPLFAYKSTSETPYKINLPKSLGTVPEVSEDGLTYTIKLR
DDAKWSDGTPVTTRDVEFWWNLVTNNKDEWASYKKGFFPDGADLKIIDEHTFSITTETKF
APAWFIDNQINKVALLPQHAWDKTSADEAVSDLDRTPEGAQKVFAYLQGEAKNLSSYATN
PLWQTVNGPWKLKEFTPDQGLTLVPNENYWGEDKPKIDALIYKAFTGDDAEFNSVRSGAI
DFGYIPAAQYNQRKAVEDKGYNVFLWPGNSITYLALNFAPQAPGSKFINQKYIRQAMQQL
IDQPTLSEKIWSGTASPTCGPVPMPAEKTGTTEGCVYKFDPEAAKKLLEDHGWKVVPDGE
TTCENPGTGANQCGEGIAAGDKLSFKLVSQSGFVSTHQMFEEIISQFGKLGIKIDMNEVP
DSVGASQACDDETPCTWDMSFFGSQTSWGFPIYASGERLFASDAPVNLGQYKNPEADKLI
EESTRSSEPNALQAYNDYLAEDLPVLWMPNPYYQITAVKKTLDLGELDATGDTWPEDWSW
STEGK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttagaaagaagcggtggatggtcaccggcgcggccctcgcaatggtcgcctcc
ctgggcctgtccgcctgtggtggcggcagcagcagcagtagcggcggtggccaggcagcc
aactcggaaaccggaaagaacgaggtcacgatggcctcgcgtacccccaactggatcttc
ccggtctccgcaaagggctacacgcagggcgagaacggccagttcatccaggcgatgtac
cgcccgctcttcgcctacaagtccacctctgaaaccccctacaagatcaacctccccaag
tccctgggcaccgttcccgaggtctctgaggacggcctgacctacaccatcaagctgcgc
gacgacgccaagtggtccgacggcacgcccgtcaccacccgcgacgttgagttctggtgg
aacctcgtcaccaacaacaaggacgaatgggcctcgtacaagaagggcttcttccccgac
ggtgccgatctgaagatcatcgacgagcacacgttctcgatcaccaccgagaccaagttc
gccccggcctggttcattgacaaccagatcaacaaggtcgctctgctcccccagcacgcc
tgggacaagaccagcgccgacgaggccgtctccgacctcgaccgcacccccgagggcgcc
cagaaggtcttcgcctacctgcagggcgaggccaagaacctgtcctcctacgccaccaac
ccgctgtggcagacggtgaacggcccctggaagctcaaggaattcacccccgaccagggc
ctgacactcgtccccaacgagaactactggggcgaggacaagcccaagatcgacgcgctg
atctacaaggccttcacgggtgacgacgccgagttcaactccgtgcgttctggcgccatc
gacttcggctacatcccggccgcgcagtacaaccagcgcaaggccgtcgaggacaagggc
tacaacgtcttcctgtggcccggcaactccatcacctacctggccctgaacttcgcaccc
caggcccccggctcgaagttcatcaaccagaagtacatccgccaggcgatgcagcagctg
atcgaccagccgaccctgtctgagaagatctggtccggcaccgcctccccgacctgtggc
cccgtcccgatgcccgccgagaagaccggcaccaccgagggctgcgtctacaagttcgat
ccggaagccgccaagaagctcctcgaggaccacggctggaaggtcgtgcccgacggtgaa
accacctgcgagaaccccggcaccggcgccaaccagtgtggcgagggcatcgcggccggc
gacaagctgagcttcaagctcgtctcccagtcgggcttcgtctccacgcaccagatgttc
gaggagatcatctcccagttcggcaagctcggcatcaagatcgacatgaacgaggtcccc
gactcggtcggtgcctcgcaggcatgtgacgacgagaccccctgcacctgggacatgtcc
ttcttcggatcccagacctcgtggggcttcccgatctacgcctccggcgagcgcctcttc
gcctctgacgctcccgtcaacctcggccagtacaagaaccccgaggctgacaagctcatc
gaagagtcgacccgctcctccgagcccaacgctctccaggcatacaacgactacctcgcg
gaggacctccccgttctgtggatgcccaacccgtactaccagatcaccgcagtgaagaag
acgctcgacctgggcgaactcgacgccaccggcgacacctggcccgaggattggtcgtgg
tcgaccgaaggtaagtaa
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