Schaalia odontolytica: FBF35_08185
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Entry
FBF35_08185 CDS
T05977
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
soo
Schaalia odontolytica
Pathway
soo00260
Glycine, serine and threonine metabolism
soo00460
Cyanoamino acid metabolism
soo00630
Glyoxylate and dicarboxylate metabolism
soo00670
One carbon pool by folate
soo00680
Methane metabolism
soo01100
Metabolic pathways
soo01110
Biosynthesis of secondary metabolites
soo01120
Microbial metabolism in diverse environments
soo01200
Carbon metabolism
soo01230
Biosynthesis of amino acids
soo01240
Biosynthesis of cofactors
soo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FBF35_08185
09102 Energy metabolism
00680 Methane metabolism
FBF35_08185
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FBF35_08185
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FBF35_08185
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FBF35_08185
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FBF35_08185
Enzymes [BR:
soo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FBF35_08185
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QCT35991
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Position
complement(1832009..1833292)
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AA seq
427 aa
AA seq
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MDSLNDMTLAQLDPEIQAVLDAELGRQRDTLEMIASENFVPRAVLEAQGSVLTNKYAEGY
PGRRYYGGCEFVDVAESLAIERAKQVFGGDYVNVQPHAGAQANAAALMAMANVGDPILGL
SLAHGGHLTHGMRLNFSGKNYKAVAYEVDRETMRIEPEKVREAALAERPRVIIAGWSAYP
RHLDFQAFRDIADEVGAALWVDMAHFAGLVAAGLHPNPVPFADVVTTTVHKTLGGPRSGM
ILSSRGEQWGKKLNTAVFPGQQGGPLMHAIAAKAIAMKVAQTDEFKDRQRRTLEGAQIIA
ERLGADDAKKAGIKLVTGGTDVHLVLVDLVDSELNGQQAEDLLHEVGITVNRNAVPFDPR
PPAVTSGLRIGTPALATRGFDAEDFAEVADIIGTTLSQGASGGNVEVDALRARVKKLTDK
HPLYAGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggattccctcaatgacatgacacttgcgcagctggatcctgagattcaggccgttctg
gacgccgagcttggtcgccagcgtgacactctcgagatgatcgcctcggagaactttgtc
ccgcgcgccgtcctcgaggcgcagggctcggtcctgactaataagtacgccgagggctac
ccgggccgccgctactacggtggctgcgagttcgtggatgtcgcagagtcgctcgccatc
gaacgtgcgaagcaggttttcggcggcgactacgtgaacgttcagccccacgccggtgcg
caggccaacgctgccgcgctcatggctatggcgaatgtcggcgacccgatcctcggcctg
tcgctggcccacggcggtcacttgacccacggcatgcgcctgaacttctcgggcaagaac
tacaaggccgtcgcctacgaggttgaccgtgagaccatgcgcatcgagcctgagaaggtt
cgtgaggctgctctcgccgagcgtccgcgcgtcatcatcgccggttggtccgcctacccg
cgtcaccttgacttccaggccttccgtgacatcgcggacgaggtcggtgccgccctctgg
gtggatatggctcacttcgcgggcctcgtggccgcgggcctgcacccgaaccccgtcccc
ttcgctgacgtggtgacgacgacggtccacaagaccctgggtggtcctcgttccggcatg
atcttgtcctcgcgcggcgagcagtggggcaagaagctcaacactgccgtgttccccggc
cagcagggcggccctctcatgcacgcgattgccgcgaaggccatcgccatgaaggtcgcg
cagaccgacgaattcaaggaccgccagcgccgcaccctcgagggcgcgcagatcattgcc
gagcgcctgggcgctgacgacgcgaagaaggccggtatcaagctggtcacgggtggcacc
gacgtgcacctcgtcctcgttgacctggtcgactccgagctcaacggtcagcaggccgag
gatctgctgcatgaggtcggtattaccgtcaaccgtaacgccgttcccttcgacccccgt
ccgccggccgtcacctcgggcctgcgcatcggcacccccgcactcgcgacgcgtggcttc
gacgccgaggacttcgccgaggttgcggacatcatcggcacgaccctgtcgcagggtgcg
tccggcggcaatgttgaggtggacgccctgcgcgcccgcgtcaagaagctgacggacaag
cacccgctgtacgccgggctctga
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