Schaalia odontolytica: FBF35_08415
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Entry
FBF35_08415 CDS
T05977
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
soo
Schaalia odontolytica
Pathway
soo03030
DNA replication
soo03430
Mismatch repair
soo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FBF35_08415
03430 Mismatch repair
FBF35_08415
03440 Homologous recombination
FBF35_08415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
soo03032
]
FBF35_08415
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_08415
Enzymes [BR:
soo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FBF35_08415
DNA replication proteins [BR:
soo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FBF35_08415
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FBF35_08415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QCT36036
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All DBs
Position
1893552..1894304
Genome browser
AA seq
250 aa
AA seq
DB search
MSWIDDPWMGFDTETTGVRALKDRLVTAALVLRIDGASYRSGISAPDQVATWLTDPGVEI
PEQATAVHGITTEQARRDGRPIEEVLHELAGSIVEHWLRGYPVVAFNATYDITLVNQELR
RHRLGSFEERLEGAPMLVVDPLVLDRKLDRFRKGKKTLTEMAPVYGAVASPDAHTAEVDV
AMTLDVLAGMVDKYPQLASMSALELMDYQLQAHQDWAEDFEKYLRKQGKDANIDREWPQI
TPRGRGDDQE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagctggatcgacgacccgtggatgggttttgacaccgagacgacgggcgtgcgcgcg
ctaaaggatcgtctcgtcaccgccgcgctggtgctgcgcatcgacggcgcttcctaccgc
agcggcatcagcgcccccgaccaggtggccacgtggctgaccgacccgggcgtcgagatc
cccgagcaggccacggccgtccacggcatcacgaccgagcaggcgcgacgcgatggccgc
cccatcgaggaggttctgcacgagctggctggctccatcgtcgagcactggctgcgcggc
tacccggtggtcgccttcaacgcgacctacgacatcacgctggtcaaccaggagctgcgc
cgccaccgcctgggttccttcgaggaacgcctggagggcgcgcccatgctcgtcgtcgac
ccgctcgtcctggatcgtaagctcgaccgcttccgcaagggcaagaagacgctgacagag
atggcgcccgtctacggggcggtcgcctcccccgacgctcacacggccgaggtcgacgtg
gccatgacgctcgacgtgctcgccggcatggtggacaagtacccgcagctggcgtccatg
agcgccctggaactcatggactaccagctccaggctcaccaggattgggccgaggacttc
gagaagtacctgcgcaagcagggcaaggacgcgaacatcgatcgcgagtggccacagatc
acgccgcgaggccgcggagacgaccaggagtaa
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