Schaalia odontolytica: FBF35_08610
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Entry
FBF35_08610 CDS
T05977
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
soo
Schaalia odontolytica
Pathway
soo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FBF35_08610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soo03021
]
FBF35_08610
03400 DNA repair and recombination proteins [BR:
soo03400
]
FBF35_08610
Enzymes [BR:
soo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FBF35_08610
Transcription machinery [BR:
soo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FBF35_08610
DNA repair and recombination proteins [BR:
soo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FBF35_08610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QCT36075
LinkDB
All DBs
Position
complement(1941580..1942575)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAERPILTEEKVSDLRSRFTLEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVP
HEFRTIEGVKEDVAEIILNIKQIVLSSENDEPVVMYLRKAGPGEVFAGDITPPAGVEIHN
PDLHLATLNEKGKLEIELTVERGRGYVSAAQNKDPQAEISRIPIDSIYSPVVKVTYKVEA
TRVEQRTDFDRLVIDVETKPAITPRDALASAGKTLVELFGLMRELNEEAEGIEVGPSTTD
ATLAADLALPIENLNLQSRSYNALRRRGILTVGELVAHSEADLLDIRNFGTKSIEEIKES
LAALGMTLKDSVMPSFGDSESAAIFSDDQSI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcagagcgacccatcctgaccgaagaaaaggtcagcgacctgcgctcccgt
ttcaccctggagcccctcgagcccgggttcggctacacgctgggtaactccctgcgtcgt
accctcctgtcctcgatcccgggtgcagcggtgacgtccatccgtattgatggcgtcccc
cacgagttccgcacgatcgaaggtgtgaaggaagatgtcgctgagatcatcctgaacatc
aagcagatcgtcctgtccagcgagaacgacgagcctgtcgtcatgtacctgcggaaggct
ggccccggcgaggttttcgccggcgacatcacgcctcccgccggcgtggagatccacaac
cccgatctgcaccttgccaccctcaacgagaagggcaagctggagatcgagctgaccgtc
gagcgtggccgtggctacgtgtcggccgctcagaacaaggatccgcaggccgagatctct
cgcattccgattgattcgatctactcgcccgtcgtcaaggtgacctacaaggtcgaggcg
acgcgtgttgagcagcgcaccgactttgatcgcctcgtcatcgacgtggagaccaagccg
gcgatcaccccgcgcgatgccctggcctcggccggcaagacgctggtggagctgttcggc
ctcatgcgtgaactgaacgaggaagcggaaggcatcgaggtgggtccgtccaccaccgac
gccaccctcgcagccgatctggctctcccgatcgagaacctgaacctgcagtcgcgttcc
tacaacgcgctgcgtcgccgcggcatcctgaccgtcggcgagctggttgctcactcggag
gccgacctgctcgacatccgcaacttcggcaccaagtcgatcgaagagatcaaggagtcc
ctggcggcccttggtatgacgctgaaggactcggtcatgccgagcttcggcgactcggag
tccgccgcgatcttttcggacgaccagtccatctga
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