Schaalia odontolytica: FBF35_09525 Help Entry FBF35_09525       CDS       T05977                                  Name (GenBank) HNH endonuclease   KO K09952   CRISPR-associated endonuclease Csn1 [EC:3.1.-.-] Organism soo  Schaalia odontolytica Brite KEGG Orthology (KO) [BR:soo00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:soo02048]     FBF35_09525 Prokaryotic defense system [BR:soo02048]  CRISPR-Cas system   Type II CRISPR-Cas system    Type II signiture cas proteins     FBF35_09525 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cas9_a RuvC_III Cas9_C Cas9_b_hairpin Cas9_Topo HNH HNH_5 HNH_4 Motif Other DBs NCBI-ProteinID:  QCT36233 LinkDB All DBs Position complement(2139242..2142685) Genome browser AA seq 1147 aa AA seqDB search MSDYSANVQHRRYRIGIDVGLKSIGFCAIEVDERGTPIKLLNSTVHLHDGGVEPGDGKDL SRKKVSGIARRTRRRRRSNEKRLADLDSYLSQQLGWQLPNLEEFDDPHEPWHVRAELLDS YVSDPAERAEMLAIAVRHIARHRGWRNSYTSVASLTRATYPSKALIKVNERVCEALGTKI VAEATQGQLASAYVADERYALQALRGTQGLFRGRQYQSDTYHELSRILELQHIDRAQIKE LTEIVFRVTHPRNGARRNMRVGHDQLPGQESKWRAEIAHPAFQKFRIVAALANLRVRSGG QERKLNANELRRVTRYVLDSALKVEDVEWFDIAEQLGIERDCLTGTAKPVFEGEPALRRP PTDAVSVIVMSSKLTKLKRWWKSANDEDRADLVKFMANSTLAEGEEFENDEVDGFLASLT DDDLAKLEELALPSGRAAYSLDSLQRLTDRMLADGCDLHEARKREFGVSSSWVPKPDPIG APVGNPAVDRVMKEVSRWLKVAVDRWGVPEAVNIEHTRSGMMSAESAKKLTSANKARRRQ IEVLAERLGGQACAGGKLNQVTKIRLLALQRQKSKCLYCGAGIRFETAEMDHIVPRSGLG STNDRNNLVAVCRECNASKGSQLFSEWAQSGSRKDKVSFDDVIERVWSWGQDPGVSPKQH KKFQAVVVARLKSKKPDQEFDARSMESVAWMAVELGKRIRGYFASASSANEGAVVPSVGL YRGRITAAARVVSGFEGCVRFTGGNGKTRLDRRHHAMDALVIALLDDRIAQLLALRDNLR FAQLVTSGADEWRRYLHSHPSENALMYDWSQHMQVAAKKFNDSLESGMVRFTMNQRLRLG SSRAHMDSVTSFEHAYLDRNGDRVPKLDKNGMRKVKEHGEFRLLSDPLPVDLIDRAETPA LWAALVKDEQFDPQTGLPADPKRTITIHGRRIGPMERIRFFGATPAGKWSASLAVRGGYV SISNTIHHVRIYKIAEEPAKYAMLRVYQVDLRHAHGKDLFSFSIPASSISMRTADKVVRK FLRDSTKKPYAWLVAGDELRVNPKFYDEGKIGEFFKEEGYGDVVEWRIVGFESATQVNLR PLRISEEGFNDETPQAVKDIAGRSKSWRVTIGALLEAGGVAVIRRNVLGEERWKSKDDRL PCSKVFE NT seq 3444 nt NT seq  +upstreamnt  +downstreamnt atgagtgattattcggcaaatgtgcagcatcgtcgctaccgcatcgggatcgacgttggc ctcaagtccattggtttctgcgcgatcgaagtcgacgaacgtggaactcccatcaagctc ctcaattcgaccgtacatctgcacgatggtggtgttgagcctggtgacgggaaagacctt agccgaaagaaagtgtcgggcatcgctcggcgaaccagaaggcgtaggcgctcgaatgag aagcgtctagcggatctagattcatacttgtcgcagcaattgggttggcagcttcctaat cttgaagagttcgacgatccgcacgaaccgtggcacgtgcgtgcggagctgctcgactcc tacgtgtcagaccctgcggagcgtgcggaaatgctagcgatcgctgtcaggcatatcgcg aggcatcgtggttggcggaattcttatacatcggttgcatcgttgactcgggctacttac ccgagcaaagcgctcattaaggtgaacgaaagggtctgtgaggctctggggacgaagatt gtcgccgaggctacgcaggggcagctggcctctgcctacgtcgcagatgaacgctatgcc cttcaggcactgcgtggcacgcaaggtctattccgaggtcgacagtaccagagcgatacc taccacgagctcagtcgaattcttgagctccaacacattgatcgtgctcaaatcaaggag ctgacagagatagttttccgagtgactcaccccaggaatggggcgcgacgaaacatgcgg gttggccacgatcagttaccggggcaggaatcgaaatggcgggccgaaattgcacatccg gcgtttcagaagttcagaatcgttgcggcactagcgaatctgagggttcgttctggtggc caggagcggaagttgaatgccaatgagctgcgacgagtaacgcgatatgttttggatagc gccctcaaggtcgaggatgttgaatggtttgatattgcagagcagctcggcattgaacgg gattgtttgacgggcaccgcgaaaccggtattcgaaggagagcccgctctgcgccgtccg ccgactgatgctgtcagtgtcattgtcatgtcgagcaagttgacgaaattgaagcgctgg tggaagtctgcgaatgacgaggatcgtgcggacctcgtaaagtttatggctaactcgacc ctcgctgagggagaggagtttgaaaacgatgaggttgatggtttcctggcttctctcaca gatgatgacctggcaaagctagaggaacttgcattgccatctggccgcgctgcgtattcc ctggacagcctgcagagactaacggatcgcatgcttgctgatggatgtgacctgcacgaa gcaagaaagcgtgagttcggggtgagcagctcctgggtccccaaaccggaccctatcggc gctcctgttggcaatcccgctgttgaccgcgtcatgaaggaagtgagtcgatggctgaag gtggccgttgatcgctggggtgttcccgaggcagtgaacatcgagcacacgcgtagcggg atgatgtccgctgaaagcgccaagaaactgacaagcgcgaataaggcgaggcggcgtcag attgaggtcttggcagagcgattaggtggacaggcatgtgctggtggaaagttgaatcag gtaacaaagatcaggcttttagcgctacagaggcaaaaatctaagtgcttgtactgtggt gcgggaattcgatttgaaaccgcagagatggaccatattgttccacgttcaggcctagga tcaaccaatgatcgaaataatctcgttgcagtctgtcgtgagtgtaacgcgagcaaaggg agtcagctgttctctgagtgggctcaatcaggaagtcgcaaagataaggtttcgttcgac gatgtgatcgaacgtgtttggtcatggggacaggacccgggggtgagtccgaagcagcat aagaagttccaagctgtcgttgttgcacgcctgaagtcgaagaagccggatcaagagttt gatgcacgatcgatggaatcggtggcatggatggcggttgagctaggcaagcgcatcagg ggatacttcgcatcagcatcctctgcaaatgaaggggcagtagttccctcagttgggctg tatcgaggccgtattactgcggcagctcgggtcgtttctggatttgagggctgtgtacgc ttcactggtggcaatggtaagacgcgtcttgatcgtcgacaccatgcaatggatgctctc gtcattgcgctacttgatgatcgcatcgcacaattacttgcactacgtgataatctgcgt tttgcgcagcttgttactagtggggctgatgagtggagacggtatctgcattctcatccg tcggaaaatgctctgatgtatgactggtctcagcatatgcaagttgcggcgaagaagttt aatgactcgctcgagagtggcatggtgcggttcaccatgaatcagcgtttacgccttgga tcgagcagagcgcacatggacagtgttacatcttttgagcatgcgtatctagaccggaat ggtgatcgtgttccgaagcttgacaagaatggaatgcgtaaagtcaaagaacatggagag tttcgtctgttgtctgatccgcttcctgtggatctcattgatcgggcggagacgcctgct ctatgggcggccctcgtgaaggatgaacagttcgatccgcagacggggctccctgcggac cccaaacggacaatcacgatccatggcagaaggatcggccctatggagcgaatccgcttc tttggagcgactcccgccgggaaatggtcagcgtcactcgcggtccggggcggttatgtg tcgatcagtaatacgatccatcacgtccgtatctacaagattgctgaagagccggcaaag tatgcaatgctgcgtgtctatcaggttgatttgcggcatgcgcatggaaaggatcttttc tcgttctcaattccagcaagctcaatctcaatgcgtacggccgataaagtggttcgcaaa ttccttcgcgacagcacgaaaaagccgtacgcttggcttgtcgctggtgatgagttaagg gtaaatccaaagttctacgatgaaggtaaaattggtgaattcttcaaagaggaaggctat ggtgatgtagtcgagtggcggatcgtcggttttgaaagcgcgacgcaagttaatctgcgt cccctgcgtatttcagaggaaggattcaatgacgaaactccacaagctgtgaaggatatc gcaggtaggagcaaatcttggcgcgtcaccattggtgcattgcttgaagcgggtggtgtt gcagtgatccgtcgtaatgttctgggcgaagagcgttggaagtcgaaagatgacagactc ccatgtagcaaggtttttgagtga

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